RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 PSMC6P62333 389 aa2.94□□□□□ -1.94
CCDC66-221ENST00000487739 SIM2Q14190 667 aaPredicted RBP2.94□□□□□ -1.94
CCDC66-221ENST00000487739 RFTN1Q14699 578 aaPredicted RBP2.94□□□□□ -1.94
CCDC66-221ENST00000487739 TMEM266Q2M3C6 531 aa2.94□□□□□ -1.94
CCDC66-221ENST00000487739 ATP1A1-AS1Q5TC04 95 aa2.94□□□□□ -1.94
CCDC66-221ENST00000487739 AGAP7PQ5VUJ5 663 aa2.94□□□□□ -1.94
CCDC66-221ENST00000487739 CCBE1Q6UXH8 406 aaPredicted RBP2.94□□□□□ -1.94
CCDC66-221ENST00000487739 KCNE4Q8WWG9 221 aa2.94□□□□□ -1.94
CCDC66-221ENST00000487739 TSACCQ96A04 125 aaPredicted RBP2.94□□□□□ -1.94
CCDC66-221ENST00000487739 NSUN4Q96CB9 384 aaKnown RBP2.94□□□□□ -1.94
CCDC66-221ENST00000487739 ZNF830Q96NB3 372 aaPredicted RBP2.94□□□□□ -1.94
CCDC66-221ENST00000487739 KLHL5Q96PQ7 755 aa2.94□□□□□ -1.94
CCDC66-221ENST00000487739 CCDC28BQ9BUN5 200 aa2.94□□□□□ -1.94
CCDC66-221ENST00000487739 GHITMQ9H3K2 345 aa2.94□□□□□ -1.94
CCDC66-221ENST00000487739 GSN-AS1Q9NRJ2 163 aa2.94□□□□□ -1.94
CCDC66-221ENST00000487739 TBC1D13Q9NVG8 400 aa2.94□□□□□ -1.94
CCDC66-221ENST00000487739 MRPL15Q9P015 296 aaKnown RBP2.94□□□□□ -1.94
CCDC66-221ENST00000487739 ABCD2Q9UBJ2 740 aa2.94□□□□□ -1.94
CCDC66-221ENST00000487739 ADD3Q9UEY8 706 aaKnown RBP2.94□□□□□ -1.94
CCDC66-221ENST00000487739 VPS28Q9UK41 221 aa2.94□□□□□ -1.94
CCDC66-221ENST00000487739 PLCL2Q9UPR0 1127 aa2.94□□□□□ -1.94
CCDC66-221ENST00000487739 A0A1W2PPK0 400 aa2.93□□□□□ -1.94
CCDC66-221ENST00000487739 A8MV72 311 aaPredicted RBP2.93□□□□□ -1.94
CCDC66-221ENST00000487739 ARHGEF33A8MVX0 844 aa2.93□□□□□ -1.94
CCDC66-221ENST00000487739 TRIM77I1YAP6 450 aa2.93□□□□□ -1.94
CCDC66-221ENST00000487739 PTGESO14684 152 aa2.93□□□□□ -1.94
CCDC66-221ENST00000487739 ECE2O60344 883 aa2.93□□□□□ -1.94
CCDC66-221ENST00000487739 RPS6KA5O75582 802 aa2.93□□□□□ -1.94
CCDC66-221ENST00000487739 BAG3O95817 575 aa2.93□□□□□ -1.94
CCDC66-221ENST00000487739 THY1P04216 161 aa2.93□□□□□ -1.94
CCDC66-221ENST00000487739 CD22P20273 847 aa2.93□□□□□ -1.94
CCDC66-221ENST00000487739 LMO2P25791 158 aa2.93□□□□□ -1.94
CCDC66-221ENST00000487739 PRELPP51888 382 aa2.93□□□□□ -1.94
CCDC66-221ENST00000487739 SRPXP78539 464 aa2.93□□□□□ -1.94
CCDC66-221ENST00000487739 NDPQ00604 133 aa2.93□□□□□ -1.94
CCDC66-221ENST00000487739 RUNX3Q13761 415 aa2.93□□□□□ -1.94
CCDC66-221ENST00000487739 TMUB2Q71RG4 321 aa2.93□□□□□ -1.94
CCDC66-221ENST00000487739 DNAAF5Q86Y56 855 aa2.93□□□□□ -1.94
CCDC66-221ENST00000487739 SLC22A15Q8IZD6 547 aa2.93□□□□□ -1.94
CCDC66-221ENST00000487739 RPLP0P6Q8NHW5 317 aa2.93□□□□□ -1.94
CCDC66-221ENST00000487739 SSC4DQ8WTU2 575 aa2.93□□□□□ -1.94
CCDC66-221ENST00000487739 B3GALT6Q96L58 329 aa2.93□□□□□ -1.94
CCDC66-221ENST00000487739 SLC2A11Q9BYW1 496 aa2.93□□□□□ -1.94
CCDC66-221ENST00000487739 MAF1Q9H063 256 aa2.93□□□□□ -1.94
CCDC66-221ENST00000487739 NOL11Q9H8H0 719 aaKnown RBP2.93□□□□□ -1.94
CCDC66-221ENST00000487739 HAO2Q9NYQ3 351 aa2.93□□□□□ -1.94
CCDC66-221ENST00000487739 TRAV24A0A0B4J272 114 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 A0A1W2PPM1 405 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 MTMR11A4FU01 709 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 CCL24O00175 119 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 HAT1O14929 419 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 PRDM1O75626 825 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 CSN3P07498 182 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 SELEP16581 610 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 ALDH1B1P30837 517 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 GPR183P32249 361 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 EIF2DP41214 584 aaKnown RBP2.92□□□□□ -1.94
CCDC66-221ENST00000487739 RXRGP48443 463 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 CLDN15P56746 228 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 OR1D5P58170 312 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 RASGEF1BQ0VAM2 473 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 PRKG2Q13237 762 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 FAM106AQ4KMX7 169 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 RILPL1Q5EBL4 403 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 ATAD3CQ5T2N8 411 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 OR4C11Q6IEV9 310 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 TMEM64Q6YI46 380 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 TTC30BQ8N4P2 665 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 GBP7Q8N8V2 638 aaPredicted RBP2.92□□□□□ -1.94
CCDC66-221ENST00000487739 LRTM2Q8N967 370 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 MRAPQ8TCY5 172 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 PROX1Q92786 737 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 HNRNPABQ99729 332 aaKnown RBP2.92□□□□□ -1.94
CCDC66-221ENST00000487739 SDCBP2Q9H190 292 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 PIH1D3Q9NQM4 214 aaKnown RBP2.92□□□□□ -1.94
CCDC66-221ENST00000487739 OLAHQ9NV23 265 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 TXNDC16Q9P2K2 825 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 TBC1D29Q9UFV1 150 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 IL36AQ9UHA7 158 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 NAALAD2Q9Y3Q0 740 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 UMODL1Q5DID0 1318 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 NPHP3Q7Z494 1330 aa2.92□□□□□ -1.94
CCDC66-221ENST00000487739 MYH14Q7Z406 1995 aaKnown RBP2.91□□□□□ -1.94
CCDC66-221ENST00000487739 COL16A1Q07092 1604 aaPredicted RBP2.91□□□□□ -1.94
CCDC66-221ENST00000487739 A0A087WZ39 114 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 hCG_1807616A0A1W2PRN6 198 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 E9PAM4 449 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 F8VVB4 439 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 F8VWA3 439 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 ATP6AP2O75787 350 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 ACSL3O95573 720 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 LY6G6DO95868 133 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 RENP00797 406 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 RPLP0P05388 317 aaKnown RBP2.91□□□□□ -1.94
CCDC66-221ENST00000487739 ADORA3P0DMS8 318 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 ALOX12P18054 663 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 CCR3P51677 355 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 RIDAP52758 137 aaKnown RBP2.91□□□□□ -1.94
CCDC66-221ENST00000487739 ACY1Q03154 408 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 NONOQ15233 471 aaKnown RBP eCLIP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms