RNA–Protein interactions for RNA: ENST00000483216.1

USP40-213, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 4

Gene USP40, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-213ENST00000483216 KRTAP7-1Q8IUC3 87 aa5.24□□□□□ -1.57
USP40-213ENST00000483216 C10orf67Q8IYJ2 551 aa5.24□□□□□ -1.57
USP40-213ENST00000483216 TMEM178AQ8NBL3 297 aa5.24□□□□□ -1.57
USP40-213ENST00000483216 KBTBD8Q8NFY9 601 aa5.24□□□□□ -1.57
USP40-213ENST00000483216 TCP11Q8WWU5 503 aa5.24□□□□□ -1.57
USP40-213ENST00000483216 SYN2Q92777 582 aaPredicted RBP5.24□□□□□ -1.57
USP40-213ENST00000483216 P3H4Q92791 437 aa5.24□□□□□ -1.57
USP40-213ENST00000483216 SLF1Q9BQI6 1058 aa5.24□□□□□ -1.57
USP40-213ENST00000483216 MYNNQ9NPC7 610 aa5.24□□□□□ -1.57
USP40-213ENST00000483216 BATF3Q9NR55 127 aa5.24□□□□□ -1.57
USP40-213ENST00000483216 ANKEF1Q9NU02 776 aa5.24□□□□□ -1.57
USP40-213ENST00000483216 CACNG5Q9UF02 275 aa5.24□□□□□ -1.57
USP40-213ENST00000483216 GRID1Q9ULK0 1009 aa5.24□□□□□ -1.57
USP40-213ENST00000483216 PYCARDQ9ULZ3 195 aa5.24□□□□□ -1.57
USP40-213ENST00000483216 TTC21BQ7Z4L5 1316 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 PTPRUQ92729 1446 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 NALCNQ8IZF0 1738 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 EDDM13A0A1B0GTR0 161 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 MSGN1A6NI15 193 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 H3BQV1 296 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 FIBPO43427 364 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 STX10O60499 249 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 ERLIN2O94905 339 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 ZNF883P0CG24 379 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 BDNFP23560 247 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 MPZP25189 248 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 PTPRCAPQ14761 206 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 UGT3A2Q3SY77 523 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 CRY2Q49AN0 593 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 C6orf163Q5TEZ5 329 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 BHLHB9Q6PI77 547 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 SYT10Q6XYQ8 523 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 CDK20Q8IZL9 346 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 EID3Q8N140 333 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 TTC30BQ8N4P2 665 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 SECISBP2LQ93073 1101 aaKnown RBP5.23□□□□□ -1.57
USP40-213ENST00000483216 FAM210AQ96ND0 272 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 URM1Q9BTM9 101 aaKnown RBP5.23□□□□□ -1.57
USP40-213ENST00000483216 CNOT10Q9H9A5 744 aaKnown RBP5.23□□□□□ -1.57
USP40-213ENST00000483216 ZDHHC18Q9NUE0 388 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 BARHL2Q9NY43 387 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 TAB2Q9NYJ8 693 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 RASAL2Q9UJF2 1139 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 GGA2Q9UJY4 613 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 XRN1Q8IZH2 1706 aaKnown RBP5.23□□□□□ -1.57
USP40-213ENST00000483216 OVOS2A0A0J9YW53 1432 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 USP6P35125 1406 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 OVOS2Q6IE36 1432 aa5.23□□□□□ -1.57
USP40-213ENST00000483216 TRBC2A0A5B9 178 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 ENO4A6NNW6 628 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 H0YHG0 523 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 TRIM77I1YAP6 450 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 PTGESO14684 152 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 CHUKO15111 745 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 KIF5CO60282 957 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 ZFAND5O76080 213 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 HAPLN1P10915 354 aaPredicted RBP5.22□□□□□ -1.57
USP40-213ENST00000483216 EZRP15311 586 aaKnown RBP5.22□□□□□ -1.57
USP40-213ENST00000483216 JAK1P23458 1154 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 CHMLP26374 656 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 OAS2P29728 719 aaKnown RBP5.22□□□□□ -1.57
USP40-213ENST00000483216 CAPZA2P47755 286 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 SNRPD1P62314 119 aaKnown RBP5.22□□□□□ -1.57
USP40-213ENST00000483216 SP3Q02447 781 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 TAF10Q12962 218 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 ERMARDQ5T6L9 678 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 PWWP2BQ6NUJ5 590 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 OLFM4Q6UX06 510 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 KRT74Q7RTS7 529 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 ARHGAP22Q7Z5H3 698 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 RTN4RL2Q86UN3 420 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 MAML2Q8IZL2 1156 aaPredicted RBP5.22□□□□□ -1.57
USP40-213ENST00000483216 KIRREL3Q8IZU9 778 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 THAP8Q8NA92 274 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 CCDC148Q8NFR7 591 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 CCDC51Q96ER9 411 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 ANKRD27Q96NW4 1050 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 OPRPNQ99935 248 aaPredicted RBP5.22□□□□□ -1.57
USP40-213ENST00000483216 UBXN6Q9BZV1 441 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 OR2B2Q9GZK3 357 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 TRPV4Q9HBA0 871 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 PDRG1Q9NUG6 133 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 ZNHIT6Q9NWK9 470 aaKnown RBP5.22□□□□□ -1.57
USP40-213ENST00000483216 P4HTMQ9NXG6 502 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 RNF186Q9NXI6 227 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 SWAP70Q9UH65 585 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 TNNQ9UQP3 1299 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 TTLL3Q9Y4R7 772 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 DLG5Q8TDM6 1919 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 ACEP12821 1306 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 TTC21AQ8NDW8 1320 aa5.22□□□□□ -1.57
USP40-213ENST00000483216 C2orf81A6NN90 581 aa5.21□□□□□ -1.58
USP40-213ENST00000483216 ARHGEF9O43307 516 aa5.21□□□□□ -1.58
USP40-213ENST00000483216 PSMD10O75832 226 aa5.21□□□□□ -1.58
USP40-213ENST00000483216 C22orf31O95567 290 aa5.21□□□□□ -1.58
USP40-213ENST00000483216 HMOX1P09601 288 aa5.21□□□□□ -1.58
USP40-213ENST00000483216 CDH3P22223 829 aa5.21□□□□□ -1.58
USP40-213ENST00000483216 GJB2P29033 226 aa5.21□□□□□ -1.58
USP40-213ENST00000483216 PCGF2P35227 344 aa5.21□□□□□ -1.58
USP40-213ENST00000483216 LUMP51884 338 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms