RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 M1APQ8TC57 530 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 SCMH1Q96GD3 660 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 FRMD6Q96NE9 622 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 PRAP1Q96NZ9 151 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 BIRC8Q96P09 236 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 MACROD1Q9BQ69 325 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 VKORC1Q9BQB6 163 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 TRIM51Q9BSJ1 452 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 LACRTQ9GZZ8 138 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 PPT2Q9UMR5 302 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 PACSIN2Q9UNF0 486 aaPredicted RBP12.09□□□□□ -0.47
TMEM54-206ENST00000482771 PRRC2AP48634 2157 aaKnown RBP12.09□□□□□ -0.47
TMEM54-206ENST00000482771 INTS1Q8N201 2190 aaKnown RBP12.09□□□□□ -0.47
TMEM54-206ENST00000482771 ACANP16112 2415 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 AKAP6Q13023 2319 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 CPAMD8Q8IZJ3 1885 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 GABRR3A8MPY1 467 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 E7ENX8 843 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 H0YIG0 161 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 MYO1CO00159 1063 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 PRRG2O14669 202 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 HAT1O14929 419 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 PSIP1O75475 530 aaKnown RBP12.08□□□□□ -0.48
TMEM54-206ENST00000482771 CCNDBP1O95273 360 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 APRTP07741 180 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 NMBRP28336 390 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 HSD17B2P37059 387 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 XCR1P46094 333 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 ABATP80404 500 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 TAP2Q03519 686 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 PTK6Q13882 451 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 EXT1Q16394 746 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 KLHL38Q2WGJ6 581 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 ACSBG2Q5FVE4 666 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 RNFT1Q5M7Z0 435 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 PRSS41Q7RTY9 318 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 MPP5Q8N3R9 675 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 HORMAD2Q8N7B1 307 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 FAM98AQ8NCA5 519 aaKnown RBP12.08□□□□□ -0.48
TMEM54-206ENST00000482771 RNF214Q8ND24 703 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 MCOLN3Q8TDD5 553 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 PHF10Q8WUB8 498 aaKnown RBP12.08□□□□□ -0.48
TMEM54-206ENST00000482771 POM121Q96HA1 1249 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 DMRTA2Q96SC8 542 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 CDCP1Q9H5V8 836 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 TREX1Q9NSU2 369 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 HCN3Q9P1Z3 774 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 ZNF148Q9UQR1 794 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 CRYL1Q9Y2S2 319 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 ANKHD1Q8IWZ3 2542 aaKnown RBP12.08□□□□□ -0.48
TMEM54-206ENST00000482771 ABCA4P78363 2273 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 SCN3AQ9NY46 2000 aa12.08□□□□□ -0.48
TMEM54-206ENST00000482771 ZNF839A8K0R7 811 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 BTNL10A8MVZ5 291 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 GOLGA8KD6RF30 607 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 GOLGA8TH3BQL2 631 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 SGK494L7N484 410 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 SMAPO00193 183 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 FANCGO15287 622 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 NEURL1O76050 574 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 VAPBO95292 243 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 NSA2O95478 260 aaKnown RBP12.07□□□□□ -0.48
TMEM54-206ENST00000482771 NADKO95544 446 aaPredicted RBP12.07□□□□□ -0.48
TMEM54-206ENST00000482771 TSPAN12O95859 305 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 SLC16A8O95907 504 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 CATP04040 527 aaKnown RBP12.07□□□□□ -0.48
TMEM54-206ENST00000482771 CYC1P08574 325 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 CD1EP15812 388 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 ATP5DP30049 168 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 BCL6P41182 706 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 AGTR2P50052 363 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 SNX1Q13596 522 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 GBX1Q14549 363 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 NSDHLQ15738 373 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 SFT2D3Q587I9 215 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 THEMIS2Q5TEJ8 643 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 CES3Q6UWW8 571 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 FGD2Q7Z6J4 655 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 CHERPQ8IWX8 916 aaKnown RBP12.07□□□□□ -0.48
TMEM54-206ENST00000482771 SLC5A8Q8N695 610 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 ZNF480Q8WV37 535 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 EBNA1BP2Q99848 306 aaKnown RBP12.07□□□□□ -0.48
TMEM54-206ENST00000482771 TREX2Q9BQ50 279 aaPredicted RBP12.07□□□□□ -0.48
TMEM54-206ENST00000482771 MMP25Q9NPA2 562 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 FAM114A2Q9NRY5 505 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 COQ3Q9NZJ6 369 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 LRFN1Q9P244 771 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 ASB1Q9Y576 335 aa12.07□□□□□ -0.48
TMEM54-206ENST00000482771 MIF4GDA9UHW6 222 aaKnown RBP12.06□□□□□ -0.48
TMEM54-206ENST00000482771 H3BMM5 538 aa12.06□□□□□ -0.48
TMEM54-206ENST00000482771 NDC80O14777 642 aa12.06□□□□□ -0.48
TMEM54-206ENST00000482771 LIASO43766 372 aa12.06□□□□□ -0.48
TMEM54-206ENST00000482771 IPO7O95373 1038 aaKnown RBP12.06□□□□□ -0.48
TMEM54-206ENST00000482771 SYF2O95926 243 aaKnown RBP12.06□□□□□ -0.48
TMEM54-206ENST00000482771 FTCDO95954 541 aa12.06□□□□□ -0.48
TMEM54-206ENST00000482771 ZSCAN5DPP0CG00 497 aa12.06□□□□□ -0.48
TMEM54-206ENST00000482771 IL1RNP18510 177 aa12.06□□□□□ -0.48
TMEM54-206ENST00000482771 NPY2RP49146 381 aa12.06□□□□□ -0.48
TMEM54-206ENST00000482771 ART1P52961 327 aa12.06□□□□□ -0.48
TMEM54-206ENST00000482771 KCNJ11Q14654 390 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms