RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 IGF2-ASQ6U949 168 aa15.16■□□□□ 0.02
COPS3-207ENST00000477299 TMEM126BQ8IUX1 230 aa15.16■□□□□ 0.02
COPS3-207ENST00000477299 TMEM151BQ8IW70 566 aa15.16■□□□□ 0.02
COPS3-207ENST00000477299 CCNYL1Q8N7R7 359 aa15.16■□□□□ 0.02
COPS3-207ENST00000477299 MFSD9Q8NBP5 474 aa15.16■□□□□ 0.02
COPS3-207ENST00000477299 GALNT6Q8NCL4 622 aa15.16■□□□□ 0.02
COPS3-207ENST00000477299 N4BP2L2Q92802 583 aaPredicted RBP15.16■□□□□ 0.02
COPS3-207ENST00000477299 TM4SF19Q96DZ7 209 aa15.16■□□□□ 0.02
COPS3-207ENST00000477299 L3HYPDHQ96EM0 354 aa15.16■□□□□ 0.02
COPS3-207ENST00000477299 WDR34Q96EX3 536 aa15.16■□□□□ 0.02
COPS3-207ENST00000477299 GATA5Q9BWX5 397 aaPredicted RBP15.16■□□□□ 0.02
COPS3-207ENST00000477299 ERVK-6Q9BXR3 956 aa15.16■□□□□ 0.02
COPS3-207ENST00000477299 DHCR7Q9UBM7 475 aaKnown RBP15.16■□□□□ 0.02
COPS3-207ENST00000477299 SERTAD3Q9UJW9 196 aa15.16■□□□□ 0.02
COPS3-207ENST00000477299 GOLGA6L10A6NI86 522 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 UBFD1O14562 309 aaKnown RBP15.15■□□□□ 0.02
COPS3-207ENST00000477299 SH3BGRLO75368 114 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 STK17BO94768 372 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 HRH2P25021 359 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 ARRB2P32121 409 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 CASP2P42575 452 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 WDR4P57081 412 aaKnown RBP15.15■□□□□ 0.02
COPS3-207ENST00000477299 RAB15P59190 212 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 ERVPABLB-1P60509 514 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 CLCQ05315 142 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 GPS2Q13227 327 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 SRSF6Q13247 344 aaKnown RBP15.15■□□□□ 0.02
COPS3-207ENST00000477299 E2F2Q14209 437 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 PRTGQ2VWP7 1150 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 TBC1D25Q3MII6 688 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 C1orf189Q5VU69 101 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 FAM199XQ6PEV8 388 aaPredicted RBP15.15■□□□□ 0.02
COPS3-207ENST00000477299 ZCCHC23Q6ZST2 131 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 SLC22A9Q8IVM8 553 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 ARHGEF39Q8N4T4 335 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 METTL27Q8N6F8 245 aaPredicted RBP15.15■□□□□ 0.02
COPS3-207ENST00000477299 ANKRD42Q8N9B4 389 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 KCT2Q8NC54 265 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.15■□□□□ 0.02
COPS3-207ENST00000477299 NAF1Q96HR8 494 aaKnown RBP15.15■□□□□ 0.02
COPS3-207ENST00000477299 AIF1LQ9BQI0 150 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 ULBP3Q9BZM4 244 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 SHCBP1LQ9BZQ2 653 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 KLHL31Q9H511 634 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 SSU72Q9NP77 194 aaKnown RBP15.15■□□□□ 0.02
COPS3-207ENST00000477299 TNFRSF12AQ9NP84 129 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 IRAK4Q9NWZ3 460 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 RUVBL1Q9Y265 456 aaKnown RBP15.15■□□□□ 0.02
COPS3-207ENST00000477299 PCDHGA7Q9Y5G6 932 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 ACTL7BQ9Y614 415 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 APC2O95996 2303 aa15.15■□□□□ 0.02
COPS3-207ENST00000477299 URB1O60287 2271 aaKnown RBP15.14■□□□□ 0.01
COPS3-207ENST00000477299 KCNE1BA0A087WTH5 132 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 TMEM120BA0PK00 339 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 C4orf51C9J302 202 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 PRPF4O43172 522 aaKnown RBP eCLIP15.14■□□□□ 0.01
COPS3-207ENST00000477299 SRPX2O60687 465 aaPredicted RBP15.14■□□□□ 0.01
COPS3-207ENST00000477299 H2AFYO75367 372 aaKnown RBP15.14■□□□□ 0.01
COPS3-207ENST00000477299 OR4F21O95013 312 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 DLGAP3O95886 979 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 SERPIND1P05546 499 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 BPGMP07738 259 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 DHRS4L1P0CG22 281 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 ITGAXP20702 1163 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 CCNG1P51959 295 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 DNAJB13P59910 316 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 RPS15AP62244 130 aaKnown RBP15.14■□□□□ 0.01
COPS3-207ENST00000477299 RELAQ04206 551 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 PCDH1Q08174 1060 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 HYAL2Q12891 473 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 RBBP7Q16576 425 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 TCHHL1Q5QJ38 904 aaPredicted RBP15.14■□□□□ 0.01
COPS3-207ENST00000477299 TMEM164Q5U3C3 297 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 LETMD1Q6P1Q0 360 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 TMIGD1Q6UXZ0 262 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 SYVN1Q86TM6 617 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 MYLK4Q86YV6 388 aaPredicted RBP15.14■□□□□ 0.01
COPS3-207ENST00000477299 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.14■□□□□ 0.01
COPS3-207ENST00000477299 LSMEM2Q8N112 164 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 CSNK1A1LQ8N752 337 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 OR4F6Q8NGB9 312 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 RDH11Q8TC12 318 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 MGARPQ8TDB4 240 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 CREB3L4Q8TEY5 395 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 ATP6V1E2Q96A05 226 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 MTFMTQ96DP5 389 aaKnown RBP15.14■□□□□ 0.01
COPS3-207ENST00000477299 PTCD3Q96EY7 689 aaKnown RBP15.14■□□□□ 0.01
COPS3-207ENST00000477299 ATP6V1G3Q96LB4 118 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 C10orf90Q96M02 699 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 SARGQ9BW04 601 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 CAPS2Q9BXY5 557 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 ASPSCR1Q9BZE9 553 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 ACTR8Q9H981 624 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 ACTR5Q9H9F9 607 aaPredicted RBP15.14■□□□□ 0.01
COPS3-207ENST00000477299 FANCEQ9HB96 536 aa15.14■□□□□ 0.01
COPS3-207ENST00000477299 TMEM184BQ9Y519 407 aaPredicted RBP15.14■□□□□ 0.01
COPS3-207ENST00000477299 CHD8Q9HCK8 2581 aa15.13■□□□□ 0.01
COPS3-207ENST00000477299 HYKKA2RU49 373 aa15.13■□□□□ 0.01
COPS3-207ENST00000477299 FITM1A5D6W6 292 aa15.13■□□□□ 0.01
COPS3-207ENST00000477299 FFAR3O14843 346 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms