RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 BTBD10Q9BSF8 475 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 EDEM2Q9BV94 578 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 CAPS2Q9BXY5 557 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 PANK2Q9BZ23 570 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 TM6SF1Q9BZW5 370 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 EGLN1Q9GZT9 426 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 NACA2Q9H009 215 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 DCLRE1BQ9H816 532 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 HOMER3Q9NSC5 361 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 B3GAT1Q9P2W7 334 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 IL20RAQ9UHF4 553 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 BAIAP2L1Q9UHR4 511 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 WDR83OSQ9Y284 106 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 MRPS7Q9Y2R9 242 aaKnown RBP3.94□□□□□ -1.78
VPS13D-207ENST00000476169 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.94□□□□□ -1.78
VPS13D-207ENST00000476169 DDX49Q9Y6V7 483 aaKnown RBP3.94□□□□□ -1.78
VPS13D-207ENST00000476169 ATXN2Q99700 1313 aaKnown RBP3.94□□□□□ -1.78
VPS13D-207ENST00000476169 CEP164Q9UPV0 1460 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 hDV102S1A0JD36 115 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 FAM47DPA6NHR8 397 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 H3BMM5 538 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 K7EQM0 130 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 EEF2KO00418 725 aaKnown RBP3.93□□□□□ -1.78
VPS13D-207ENST00000476169 CHADO15335 359 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 LANCL1O43813 399 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 GPR137BO60478 399 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 NDUFS7O75251 213 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 TOM1L1O75674 476 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 BAG3O95817 575 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 NAGAP17050 411 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 CALB2P22676 271 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 TAGLN2P37802 199 aaKnown RBP3.93□□□□□ -1.78
VPS13D-207ENST00000476169 MXI1P50539 228 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 CLCNKAP51800 687 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 CCZ1BP86790 482 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 CCZ1P86791 482 aaPredicted RBP3.93□□□□□ -1.78
VPS13D-207ENST00000476169 CACNG1Q06432 222 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 SLC3A1Q07837 685 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 SRSF1Q07955 248 aaKnown RBP eCLIP3.93□□□□□ -1.78
VPS13D-207ENST00000476169 DMPKQ09013 629 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 PNRC1Q12796 327 aaPredicted RBP3.93□□□□□ -1.78
VPS13D-207ENST00000476169 TRAF1Q13077 416 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 MYBPHQ13203 477 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 TMED1Q13445 227 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 EZH2Q15910 746 aaKnown RBP3.93□□□□□ -1.78
VPS13D-207ENST00000476169 PDK4Q16654 411 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 CCDC142Q17RM4 750 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 CMPK2Q5EBM0 449 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 MTX3Q5HYI7 312 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 CYP4A22Q5TCH4 519 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 MORN5Q5VZ52 161 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 LYSMD4Q5XG99 296 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 TTC27Q6P3X3 843 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 FUT10Q6P4F1 479 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 DLK2Q6UY11 383 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 RUFY3Q7L099 469 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 LRRC70Q7Z2Q7 622 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 ATG9AQ7Z3C6 839 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 ERASQ7Z444 233 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 PIP4P1Q86T03 277 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 ZNF679Q8IYX0 411 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 CDK20Q8IZL9 346 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 GBGT1Q8N5D6 347 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 ZNF548Q8NEK5 533 aaPredicted RBP3.93□□□□□ -1.78
VPS13D-207ENST00000476169 OR14A16Q8NHC5 309 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 TSACCQ96A04 125 aaPredicted RBP3.93□□□□□ -1.78
VPS13D-207ENST00000476169 DHX58Q96C10 678 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 LRFN5Q96NI6 719 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 TSSK2Q96PF2 358 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 ZNF607Q96SK3 696 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 ZBTB18Q99592 522 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 MMTAG2Q9BU76 263 aaKnown RBP3.93□□□□□ -1.78
VPS13D-207ENST00000476169 FICDQ9BVA6 458 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 NACAP1Q9BZK3 213 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 TRPV6Q9H1D0 765 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 LRMDAQ9H2I8 198 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 VCX2Q9H322 139 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 YY1AP1Q9H869 796 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 PHPT1Q9NRX4 125 aaPredicted RBP3.93□□□□□ -1.78
VPS13D-207ENST00000476169 PTTG2Q9NZH5 202 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 KLHL9Q9P2J3 617 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 IL36RNQ9UBH0 155 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 NCAPD2Q15021 1401 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 ABCC4O15439 1325 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 PCDH11YQ9BZA8 1340 aa3.93□□□□□ -1.78
VPS13D-207ENST00000476169 ZNF608Q9ULD9 1512 aaPredicted RBP3.92□□□□□ -1.78
VPS13D-207ENST00000476169 IGLV5-39A0A0G2JS06 123 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 A0A0U1RQJ8 604 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 RPS10-NUDT3A0A1W2PQS6 291 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 C15orf62A8K5M9 175 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 E5RGE8 158 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 PES1O00541 588 aaKnown RBP3.92□□□□□ -1.78
VPS13D-207ENST00000476169 XPO1O14980 1071 aaKnown RBP3.92□□□□□ -1.78
VPS13D-207ENST00000476169 ERLIN1O75477 346 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 LDLRP01130 860 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 H1F0P07305 194 aaKnown RBP3.92□□□□□ -1.78
VPS13D-207ENST00000476169 SFTPBP07988 381 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 ASNSP08243 561 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 CCDC159P0C7I6 412 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 CLUP10909 449 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms