RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 CFAP54Q96N23 3096 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 WDFY4Q6ZS81 3184 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 SCN8AQ9UQD0 1980 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 IGLV9-49A0A0B4J1Y8 123 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 CCDC196A0A1B0GTZ2 297 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 A0A1W2PRG0 241 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 ESYT2A0FGR8 921 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 CLRN2A0PK11 232 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 CCDC189A1A4V9 331 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 ERICH2A1L162 156 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 USP27XA6NNY8 438 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 TSPAN4O14817 238 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 POLR2DO15514 142 aaKnown RBP1.42□□□□□ -2.18
CCDC39-203ENST00000473854 HOXC11O43248 304 aaPredicted RBP1.42□□□□□ -2.18
CCDC39-203ENST00000473854 KLRC4O43908 158 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 BAG3O95817 575 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 NDUFB10O96000 172 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 HPP00738 406 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 CALM1P0DP23 149 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 CALM2P0DP24 149 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 CALM3P0DP25 149 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 TOP1P11387 765 aaKnown RBP1.42□□□□□ -2.18
CCDC39-203ENST00000473854 ATP1A3P13637 1013 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 IL7RP16871 459 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 ZNF182P17025 639 aaPredicted RBP1.42□□□□□ -2.18
CCDC39-203ENST00000473854 ZNF32P17041 273 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 CMA1P23946 247 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 ALDH1B1P30837 517 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 NT5C2P49902 561 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 NAPAP54920 295 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 CD81P60033 236 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 SNAP25P60880 206 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 HNRNPKP61978 463 aaKnown RBP eCLIP1.42□□□□□ -2.18
CCDC39-203ENST00000473854 TRPC3Q13507 836 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 PDE1CQ14123 709 aaPredicted RBP1.42□□□□□ -2.18
CCDC39-203ENST00000473854 TRIM29Q14134 588 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 KARSQ15046 597 aaKnown RBP1.42□□□□□ -2.18
CCDC39-203ENST00000473854 CDC37Q16543 378 aaPredicted RBP1.42□□□□□ -2.18
CCDC39-203ENST00000473854 MOGAT2Q3SYC2 334 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 HSP90AA4PQ58FG1 418 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 RILPL1Q5EBL4 403 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 CYP4A22Q5TCH4 519 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 JAKMIP3Q5VZ66 844 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 ATL3Q6DD88 541 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 LCN10Q6JVE6 187 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 TATDN1Q6P1N9 297 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 INTS8Q75QN2 995 aaKnown RBP1.42□□□□□ -2.18
CCDC39-203ENST00000473854 GSTA5Q7RTV2 222 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 APTXQ7Z2E3 356 aaKnown RBP1.42□□□□□ -2.18
CCDC39-203ENST00000473854 PTOV1Q86YD1 416 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 BLIDQ8IZY5 108 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 ZNF843Q8N446 348 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 ESX1Q8N693 406 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 EMC1Q8N766 993 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 PDILTQ8N807 584 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 NIPA2Q8N8Q9 360 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 ZNF383Q8NA42 475 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 KIAA0895Q8NCT3 520 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 CNNM3Q8NE01 707 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 CCDC148Q8NFR7 591 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 OR1J2Q8NGS2 313 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 ACER1Q8TDN7 264 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 HPSE2Q8WWQ2 592 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 CRYGNQ8WXF5 182 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 ST8SIA4Q92187 359 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 SMPDL3BQ92485 455 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 TEKT1Q969V4 418 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 ZUFSPQ96AP4 578 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 DHX58Q96C10 678 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 RRP36Q96EU6 259 aaKnown RBP1.42□□□□□ -2.18
CCDC39-203ENST00000473854 RRNAD1Q96FB5 475 aaKnown RBP1.42□□□□□ -2.18
CCDC39-203ENST00000473854 APOPT1Q96IL0 206 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 NSL1Q96IY1 281 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 TMEM68Q96MH6 324 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 TIGD1Q96MW7 591 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 MBOAT7Q96N66 472 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 BPIFA3Q9BQP9 254 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 FUZQ9BT04 418 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 IDI2Q9BXS1 227 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 XPO4Q9C0E2 1151 aaKnown RBP1.42□□□□□ -2.18
CCDC39-203ENST00000473854 TMEM39BQ9GZU3 492 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 UBA5Q9GZZ9 404 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 ZMYND12Q9H0C1 365 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 BLZF1Q9H2G9 400 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 ASB8Q9H765 288 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 TDRD3Q9H7E2 651 aaKnown RBP1.42□□□□□ -2.18
CCDC39-203ENST00000473854 JMJD4Q9H9V9 463 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 GNB4Q9HAV0 340 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 WASH6PQ9NQA3 447 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 ASAH2Q9NR71 780 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 BLOC1S4Q9NUP1 217 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 ANO10Q9NW15 660 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 PPP1R14DQ9NXH3 145 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 PDP2Q9P2J9 529 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 COPG2Q9UBF2 871 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 STK39Q9UEW8 545 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 FBXL17Q9UF56 701 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 SWAP70Q9UH65 585 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 GJD2Q9UKL4 321 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 TSPAN16Q9UKR8 245 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms