RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 CLEC18AA5D8T8 446 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 CCNT2O60583 730 aaKnown RBP16.72■□□□□ 0.27
CPSF4-209ENST00000465132 SNUPNO95149 360 aaKnown RBP16.72■□□□□ 0.27
CPSF4-209ENST00000465132 FGF5P12034 268 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 MTHFD2P13995 350 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 KCNC1P48547 511 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 HERVK_113P63132 956 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 HSD11B2P80365 405 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 RELAQ04206 551 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 CDC16Q13042 620 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 ZC3H12BQ5HYM0 836 aaKnown RBP16.72■□□□□ 0.27
CPSF4-209ENST00000465132 CFAP157Q5JU67 520 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 HHATQ5VTY9 493 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 SUSD1Q6UWL2 747 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 CLEC18BQ6UXF7 455 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 MBOAT1Q6ZNC8 495 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 FAM92BQ6ZTR7 304 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 BPHLQ86WA6 291 aaPredicted RBP16.72■□□□□ 0.27
CPSF4-209ENST00000465132 LRRC56Q8IYG6 542 aaPredicted RBP16.72■□□□□ 0.27
CPSF4-209ENST00000465132 ARFGAP2Q8N6H7 521 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 SNX31Q8N9S9 440 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 CLEC18CQ8NCF0 446 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 ARMC2Q8NEN0 867 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 OR2L3Q8NG85 312 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 OR2A1Q8NGT9 310 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 KLHL6Q8WZ60 621 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 PHF21BQ96EK2 531 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 FAM111AQ96PZ2 611 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 ERVK-6Q9BXR3 956 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 PITHD1Q9GZP4 211 aaPredicted RBP16.72■□□□□ 0.27
CPSF4-209ENST00000465132 FANCEQ9HB96 536 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 PDE7BQ9NP56 450 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 ABCF3Q9NUQ8 709 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 TMEM184CQ9NVA4 438 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 SPHK1Q9NYA1 384 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 COPG2Q9UBF2 871 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 TP53TG5Q9Y2B4 290 aa16.72■□□□□ 0.27
CPSF4-209ENST00000465132 A8MT66 165 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 FOXO6A8MYZ6 492 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 BIRC5O15392 142 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 PRICKLE3O43900 615 aaPredicted RBP16.71■□□□□ 0.27
CPSF4-209ENST00000465132 FURINP09958 794 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 NPPBP16860 134 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 IMPDH1P20839 514 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 HSPA7P48741 367 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 CCR8P51685 355 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 DNAJB13P59910 316 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 KLRB1Q12918 225 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 LAPTM5Q13571 262 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 ERV3-1Q14264 604 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 FASTKQ14296 549 aaKnown RBP16.71■□□□□ 0.27
CPSF4-209ENST00000465132 HIST2H2ACQ16777 129 aaPredicted RBP16.71■□□□□ 0.27
CPSF4-209ENST00000465132 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.71■□□□□ 0.27
CPSF4-209ENST00000465132 PAGE2BQ5JRK9 111 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 LIPMQ5VYY2 423 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 HIST2H2AA3Q6FI13 130 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 CDHR3Q6ZTQ4 885 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 TAX1BP1Q86VP1 789 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 TRIM42Q8IWZ5 723 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 C2orf73Q8N5S3 287 aaPredicted RBP16.71■□□□□ 0.27
CPSF4-209ENST00000465132 PPFIBP2Q8ND30 876 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 PPP1R14CQ8TAE6 165 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 N4BP2L2Q92802 583 aaPredicted RBP16.71■□□□□ 0.27
CPSF4-209ENST00000465132 UBE2E3Q969T4 207 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 C1QTNF3Q9BXJ4 246 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 EHD1Q9H4M9 534 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 ZNF446Q9NWS9 450 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 OXSMQ9NWU1 459 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 SOHLH2Q9NX45 425 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 SEMA5BQ9P283 1151 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 KCND3Q9UK17 655 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 POLHQ9Y253 713 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 SLC22A14Q9Y267 594 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 KLK4Q9Y5K2 254 aa16.71■□□□□ 0.27
CPSF4-209ENST00000465132 DOPEY2Q9Y3R5 2298 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 A0A1W2PPV9 198 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 TRIM13O60858 407 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 SASH3O75995 380 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 MLYCDO95822 493 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 CCNYL3P0C7X3 344 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 NEFHP12036 1026 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 NELFEP18615 380 aaKnown RBP16.7■□□□□ 0.26
CPSF4-209ENST00000465132 EEF1DP29692 281 aaKnown RBP16.7■□□□□ 0.26
CPSF4-209ENST00000465132 SERPINB5P36952 375 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 GMPRP36959 345 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 ACY1Q03154 408 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 TCTN3Q6NUS6 607 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 PPP1R3BQ86XI6 285 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 KIRREL3Q8IZU9 778 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 KRT78Q8N1N4 520 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 TMEM151AQ8N4L1 468 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 C19orf47Q8N9M1 422 aaKnown RBP16.7■□□□□ 0.26
CPSF4-209ENST00000465132 OR8K5Q8NH50 307 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 SLC5A11Q8WWX8 675 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 ATP6V1E2Q96A05 226 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 PYCR2Q96C36 320 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 L3HYPDHQ96EM0 354 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 MAP3K3Q99759 626 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 TRMOQ9BU70 441 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 EFCAB11Q9BUY7 163 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms