RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 SSTR1P30872 391 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 ARCN1P48444 511 aaKnown RBP2.75□□□□□ -1.97
HPS3-203ENST00000460822 KRTAP10-6P60371 365 aaPredicted RBP2.75□□□□□ -1.97
HPS3-203ENST00000460822 RELQ04864 619 aaPredicted RBP2.75□□□□□ -1.97
HPS3-203ENST00000460822 SULT2A1Q06520 285 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 DSC1Q08554 894 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 KIR2DS5Q14953 304 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 HLFQ16534 295 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 RBBP7Q16576 425 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 GLIPR1L2Q4G1C9 344 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 FASTKD1Q53R41 847 aaKnown RBP2.75□□□□□ -1.97
HPS3-203ENST00000460822 SPDYCQ5MJ68 293 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 PM20D1Q6GTS8 502 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 TRNP1Q6NT89 227 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 CORO6Q6QEF8 472 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 PIWIL4Q7Z3Z4 852 aaKnown RBP2.75□□□□□ -1.97
HPS3-203ENST00000460822 ADAMTSL2Q86TH1 951 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 NUDT13Q86X67 352 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 TMEM126BQ8IUX1 230 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 CDK20Q8IZL9 346 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 LGI2Q8N0V4 545 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 CCDC63Q8NA47 563 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 SLC26A7Q8TE54 656 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 FAM216AQ8WUB2 273 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 CHURC1Q8WUH1 139 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 WBP2Q969T9 261 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 CFAP36Q96G28 342 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 RASL10BQ96S79 203 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 C17orf62Q9BQA9 187 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 NEURL2Q9BR09 285 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 IDI2Q9BXS1 227 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 CARD9Q9H257 536 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 EXTL2Q9UBQ6 330 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 TRIM10Q9UDY6 481 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 LAMP5Q9UJQ1 280 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 HPCAL4Q9UM19 191 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 BRD4O60885 1362 aaPredicted RBP2.75□□□□□ -1.97
HPS3-203ENST00000460822 NESP48681 1621 aa2.75□□□□□ -1.97
HPS3-203ENST00000460822 IGLV5-52A0A0A0MRZ9 124 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 CLRN2A0PK11 232 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 ARHGAP42A6NI28 874 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 RNASEH1O60930 286 aaKnown RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 FRAT2O75474 233 aaPredicted RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 PRDM1O75626 825 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 PALMO75781 387 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 TSPY4P0CV99 314 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 TSPY10P0CW01 314 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 HLA-DOBP13765 273 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 CPA3P15088 417 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 DGKAP23743 735 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 ACP1P24666 158 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 CDC25AP30304 524 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 USP8P40818 1118 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 MDH1P40925 334 aaKnown RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 KCNJ4P48050 445 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 MLLT10P55197 1068 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 SRP54P61011 504 aaKnown RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 EEF1A2Q05639 463 aaKnown RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 CACNG1Q06432 222 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 IL10RBQ08334 325 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 ELP6Q0PNE2 266 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 SGCGQ13326 291 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 MFAP5Q13361 173 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 GTF2H2Q13888 395 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 DPYSQ14117 519 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 CEBPEQ15744 281 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 ACKR1Q16570 336 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 ODF4Q2M2E3 257 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 CCDC40Q4G0X9 1142 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 CEP55Q53EZ4 464 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 TAF1BQ53T94 588 aaPredicted RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 OR6B2Q6IFH4 312 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 GTF2H2CQ6P1K8 395 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 FAM171BQ6P995 826 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 PSRC1Q6PGN9 363 aaPredicted RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 PACS1Q6VY07 963 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 ANKRD33Q7Z3H0 272 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 LONP2Q86WA8 852 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 GPALPP1Q8IXQ4 340 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 RBMXL3Q8N7X1 1067 aaKnown RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 RDM1Q8NG50 284 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 TMED6Q8WW62 240 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 RAB7BQ96AH8 199 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 DTNBP1Q96EV8 351 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 LINGO1Q96FE5 620 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 CDCA5Q96FF9 252 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 PGM2Q96G03 612 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 SGK494Q96LW2 274 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 NSMCE2Q96MF7 247 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 DDX50Q9BQ39 737 aaKnown RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 CCDC3Q9BQI4 270 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 ZNF577Q9BSK1 485 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 KRTAP1-5Q9BYS1 174 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 COQ10BQ9H8M1 238 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 GPN1Q9HCN4 374 aaPredicted RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 RRAGDQ9NQL2 400 aaPredicted RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 OLFML3Q9NRN5 406 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 MRPL17Q9NRX2 175 aaKnown RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 ZNF701Q9NV72 531 aaPredicted RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 HIF1ANQ9NWT6 349 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms