RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 CNOT11Q9UKZ1 510 aaKnown RBP14.32□□□□□ -0.12
PTPRU-205ENST00000460170 DLGAP4Q9Y2H0 992 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 TCRBV5S1A1TA0A578 114 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 INMTO95050 263 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 C6orf47O95873 294 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 PDYNP01213 254 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 OR4D2P58180 307 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 LCN1P1Q5VSP4 162 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 FLCNQ8NFG4 579 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 SOX17Q9H6I2 414 aaPredicted RBP14.32□□□□□ -0.12
PTPRU-205ENST00000460170 CARS2Q9HA77 564 aaKnown RBP14.32□□□□□ -0.12
PTPRU-205ENST00000460170 PCTPQ9UKL6 214 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 BACE2Q9Y5Z0 518 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 IRAK3Q9Y616 596 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 SPIN1Q9Y657 262 aaPredicted RBP14.32□□□□□ -0.12
PTPRU-205ENST00000460170 A0A1B0GUL6 1792 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 J3QRK9 145 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 PENKP01210 267 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-205ENST00000460170 JUNP05412 331 aaKnown RBP14.31□□□□□ -0.12
PTPRU-205ENST00000460170 CHRM1P11229 460 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-205ENST00000460170 MOGQ16653 247 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 TYSND1Q2T9J0 566 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 NCEH1Q6PIU2 408 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 JAZF1Q86VZ6 243 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 TTC9BQ8N6N2 239 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 ZNF433Q8N7K0 673 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-205ENST00000460170 C3orf58Q8NDZ4 430 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 OR4K1Q8NGD4 311 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 FBXL8Q96CD0 374 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 TRPV5Q9NQA5 729 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 UBAP1Q9NZ09 502 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 SLC16A5O15375 505 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 PRSS56P0CW18 603 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 RORCP51449 518 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 PNPLA1Q8N8W4 532 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 KLHL6Q8WZ60 621 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 OR51V1Q9H2C8 321 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 ANKRA2Q9H9E1 313 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 RIMKLBQ9ULI2 386 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 SNX7Q9UNH6 387 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 HCN1O60741 890 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 LEFTY1O75610 366 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 MPC1LP0DKB6 136 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 GJA5P36382 358 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 MS4A2Q01362 244 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 ZNF829Q3KNS6 432 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-205ENST00000460170 C5orf22Q49AR2 442 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 COLEC12Q5KU26 742 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 LCN8Q6JVE9 175 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 SUSD1Q6UWL2 747 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 ARHGAP12Q8IWW6 846 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 TMEM145Q8NBT3 493 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 GPR151Q8TDV0 419 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 ISOC1Q96CN7 298 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 NECTIN3Q9NQS3 549 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 TAS2R7Q9NYW3 318 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 MYH14Q7Z406 1995 aaKnown RBP14.31□□□□□ -0.12
PTPRU-205ENST00000460170 FABP12A6NFH5 140 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 CLPXO76031 633 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 CYBAP13498 195 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 GSTM3P21266 225 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 CSTF2P33240 577 aaKnown RBP eCLIP14.31□□□□□ -0.12
PTPRU-205ENST00000460170 C10orf62Q5T681 223 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-205ENST00000460170 DCUN1D3Q8IWE4 304 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 AQP11Q8NBQ7 271 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 BPIFB1Q8TDL5 484 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 UCK2Q9BZX2 261 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 ARHGAP39Q9C0H5 1083 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 GSTO2Q9H4Y5 243 aa14.31□□□□□ -0.12
PTPRU-205ENST00000460170 CPSF4LA6NMK7 179 aaKnown RBP14.3□□□□□ -0.12
PTPRU-205ENST00000460170 K7ERQ8 282 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 ACOX3O15254 700 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 MATN4O95460 622 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 LATS1O95835 1130 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 RPL10P27635 214 aaKnown RBP14.3□□□□□ -0.12
PTPRU-205ENST00000460170 ELK4P28324 431 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 NDUFS1P28331 727 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 VMACQ2NL98 169 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 LIN54Q6MZP7 749 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 C17orf99Q6UX52 265 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 GRASPQ7Z6J2 395 aaPredicted RBP14.3□□□□□ -0.12
PTPRU-205ENST00000460170 CDH24Q86UP0 819 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 MINDY2Q8NBR6 621 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 OR10H4Q8NGA5 316 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 ALPK1Q96QP1 1244 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 REEP4Q9H6H4 257 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 NKIRAS2Q9NYR9 191 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 PCDHGA7Q9Y5G6 932 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 MYO18AQ92614 2054 aaKnown RBP14.3□□□□□ -0.12
PTPRU-205ENST00000460170 NME4O00746 187 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 FGF4P08620 206 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 C2orf27AQ580R0 203 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 SCAIQ8N9R8 606 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 PTERQ96BW5 349 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 MGME1Q9BQP7 344 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 IFT27Q9BW83 186 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 UTS2RQ9UKP6 389 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 MAST2Q6P0Q8 1798 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 SOCS7O14512 581 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 HMGN1P05114 100 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms