RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 ZNF700Q9H0M5 742 aa16.18■□□□□ 0.18
TRIM39-209ENST00000428728 DDX47Q9H0S4 455 aaKnown RBP16.18■□□□□ 0.18
TRIM39-209ENST00000428728 ATG10Q9H0Y0 220 aa16.18■□□□□ 0.18
TRIM39-209ENST00000428728 OLAHQ9NV23 265 aa16.18■□□□□ 0.18
TRIM39-209ENST00000428728 TMEM184CQ9NVA4 438 aa16.18■□□□□ 0.18
TRIM39-209ENST00000428728 LOC102723996A0A087X1L8 192 aa16.17■□□□□ 0.18
TRIM39-209ENST00000428728 IGHV3-20A0A0C4DH32 117 aa16.17■□□□□ 0.18
TRIM39-209ENST00000428728 DNALI1O14645 258 aaPredicted RBP16.17■□□□□ 0.18
TRIM39-209ENST00000428728 SEC24DO94855 1032 aaPredicted RBP16.17■□□□□ 0.18
TRIM39-209ENST00000428728 BMP10O95393 424 aa16.17■□□□□ 0.18
TRIM39-209ENST00000428728 C8GP07360 202 aa16.17■□□□□ 0.18
TRIM39-209ENST00000428728 C8orf89P0DMQ9 161 aa16.17■□□□□ 0.18
TRIM39-209ENST00000428728 EDN3P14138 238 aa16.17■□□□□ 0.18
TRIM39-209ENST00000428728 CDKN2DP55273 166 aa16.17■□□□□ 0.18
TRIM39-209ENST00000428728 CSNK1G2P78368 415 aa16.17■□□□□ 0.18
TRIM39-209ENST00000428728 TIAL1Q01085 375 aaKnown RBP eCLIP16.17■□□□□ 0.18
TRIM39-209ENST00000428728 NAE1Q13564 534 aa16.17■□□□□ 0.18
TRIM39-209ENST00000428728 AGTRAPQ6RW13 159 aa16.17■□□□□ 0.18
TRIM39-209ENST00000428728 PAQR3Q6TCH7 311 aa16.17■□□□□ 0.18
TRIM39-209ENST00000428728 C17orf64Q86WR6 236 aa16.17■□□□□ 0.18
TRIM39-209ENST00000428728 BCORP1Q8N888 145 aa16.17■□□□□ 0.18
TRIM39-209ENST00000428728 LINGO1Q96FE5 620 aa16.17■□□□□ 0.18
TRIM39-209ENST00000428728 CCDC138Q96M89 665 aa16.17■□□□□ 0.18
TRIM39-209ENST00000428728 VN1R1Q9GZP7 353 aa16.17■□□□□ 0.18
TRIM39-209ENST00000428728 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.17■□□□□ 0.18
TRIM39-209ENST00000428728 TAS2R13Q9NYV9 303 aa16.17■□□□□ 0.18
TRIM39-209ENST00000428728 TRAV17A0A0B4J275 112 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 H0YIG0 161 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 SGK494L7N484 410 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 PCDH17O14917 1159 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 LRRTM2O43300 516 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 NSA2O95478 260 aaKnown RBP16.16■□□□□ 0.18
TRIM39-209ENST00000428728 CDH1P12830 882 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 HRH2P25021 359 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 GABRB3P28472 473 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 DCTP40126 519 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 BCL6P41182 706 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 XCR1P46094 333 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 TNFSF10P50591 281 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 PGGT1BP53609 377 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 SP140Q13342 867 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 PHKG1Q16816 387 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 BBS9Q3SYG4 887 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 MSS51Q4VC12 460 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 SPANXN3Q5MJ09 141 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 TMEM205Q6UW68 189 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 RIPOR1Q6ZS17 1223 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 OR51Q1Q8NH59 317 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 GABPB2Q8TAK5 448 aaPredicted RBP16.16■□□□□ 0.18
TRIM39-209ENST00000428728 METTL21AQ8WXB1 218 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 CFAP36Q96G28 342 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 SLX1AQ9BQ83 275 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 RBCK1Q9BYM8 510 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 PCBD2Q9H0N5 130 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 PARVBQ9HBI1 364 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 SNX12Q9UMY4 172 aa16.16■□□□□ 0.18
TRIM39-209ENST00000428728 MYO7BQ6PIF6 2116 aa16.15■□□□□ 0.18
TRIM39-209ENST00000428728 RDH16O75452 317 aa16.15■□□□□ 0.18
TRIM39-209ENST00000428728 TTC4O95801 387 aa16.15■□□□□ 0.18
TRIM39-209ENST00000428728 WDPCPO95876 746 aa16.15■□□□□ 0.18
TRIM39-209ENST00000428728 PER3P56645 1201 aa16.15■□□□□ 0.18
TRIM39-209ENST00000428728 ZNF33BQ06732 778 aa16.15■□□□□ 0.18
TRIM39-209ENST00000428728 PDAP1Q13442 181 aaKnown RBP16.15■□□□□ 0.18
TRIM39-209ENST00000428728 HP1BP3Q5SSJ5 553 aaPredicted RBP16.15■□□□□ 0.18
TRIM39-209ENST00000428728 ABHD17BQ5VST6 288 aa16.15■□□□□ 0.18
TRIM39-209ENST00000428728 TMEM214Q6NUQ4 689 aaKnown RBP16.15■□□□□ 0.18
TRIM39-209ENST00000428728 HIBCHQ6NVY1 386 aaPredicted RBP16.15■□□□□ 0.18
TRIM39-209ENST00000428728 RPUSD3Q6P087 351 aaKnown RBP16.15■□□□□ 0.18
TRIM39-209ENST00000428728 ASPGQ86U10 573 aa16.15■□□□□ 0.18
TRIM39-209ENST00000428728 LURAP1LQ8IV03 231 aa16.15■□□□□ 0.18
TRIM39-209ENST00000428728 IGDCC3Q8IVU1 814 aa16.15■□□□□ 0.18
TRIM39-209ENST00000428728 GPATCH11Q8N954 259 aa16.15■□□□□ 0.18
TRIM39-209ENST00000428728 KCT2Q8NC54 265 aa16.15■□□□□ 0.18
TRIM39-209ENST00000428728 CAMKVQ8NCB2 501 aa16.15■□□□□ 0.18
TRIM39-209ENST00000428728 CERS2Q96G23 380 aa16.15■□□□□ 0.18
TRIM39-209ENST00000428728 TUBB6Q9BUF5 446 aa16.15■□□□□ 0.18
TRIM39-209ENST00000428728 ANKHQ9HCJ1 492 aa16.15■□□□□ 0.18
TRIM39-209ENST00000428728 PPANQ9NQ55 473 aaKnown RBP16.15■□□□□ 0.18
TRIM39-209ENST00000428728 UNC79Q9P2D8 2635 aa16.15■□□□□ 0.18
TRIM39-209ENST00000428728 KCNE1BA0A087WTH5 132 aa16.14■□□□□ 0.17
TRIM39-209ENST00000428728 PABPN1LA6NDY0 278 aaKnown RBP16.14■□□□□ 0.17
TRIM39-209ENST00000428728 OR2W5A6NFC9 320 aa16.14■□□□□ 0.17
TRIM39-209ENST00000428728 ZNF860A6NHJ4 632 aa16.14■□□□□ 0.17
TRIM39-209ENST00000428728 CCND1P24385 295 aa16.14■□□□□ 0.17
TRIM39-209ENST00000428728 GRK3P35626 688 aa16.14■□□□□ 0.17
TRIM39-209ENST00000428728 KCNK10P57789 538 aa16.14■□□□□ 0.17
TRIM39-209ENST00000428728 AP2B1P63010 937 aa16.14■□□□□ 0.17
TRIM39-209ENST00000428728 MEF2AQ02078 507 aaPredicted RBP16.14■□□□□ 0.17
TRIM39-209ENST00000428728 SRSF11Q05519 484 aaKnown RBP16.14■□□□□ 0.17
TRIM39-209ENST00000428728 BTBD16Q32M84 506 aa16.14■□□□□ 0.17
TRIM39-209ENST00000428728 LCTLQ6UWM7 567 aa16.14■□□□□ 0.17
TRIM39-209ENST00000428728 CPEB2Q7Z5Q1 589 aaKnown RBP16.14■□□□□ 0.17
TRIM39-209ENST00000428728 SLC26A11Q86WA9 606 aa16.14■□□□□ 0.17
TRIM39-209ENST00000428728 CNTN4Q8IWV2 1026 aa16.14■□□□□ 0.17
TRIM39-209ENST00000428728 HAS2Q92819 552 aa16.14■□□□□ 0.17
TRIM39-209ENST00000428728 PYCR2Q96C36 320 aa16.14■□□□□ 0.17
TRIM39-209ENST00000428728 THAP11Q96EK4 314 aa16.14■□□□□ 0.17
TRIM39-209ENST00000428728 IMMP1LQ96LU5 166 aa16.14■□□□□ 0.17
TRIM39-209ENST00000428728 TAAR6Q96RI8 345 aa16.14■□□□□ 0.17
TRIM39-209ENST00000428728 SGPP1Q9BX95 441 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms