RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 CXorf57Q6NSI4 855 aaKnown RBP12.77□□□□□ -0.37
TNFRSF8-203ENST00000417814 SNX20Q7Z614 316 aa12.77□□□□□ -0.37
TNFRSF8-203ENST00000417814 RIMKLAQ8IXN7 391 aa12.77□□□□□ -0.37
TNFRSF8-203ENST00000417814 CELF2-AS1Q8N7Q2 184 aa12.77□□□□□ -0.37
TNFRSF8-203ENST00000417814 HDAC2Q92769 488 aaKnown RBP12.77□□□□□ -0.37
TNFRSF8-203ENST00000417814 SGIP1Q9BQI5 828 aa12.77□□□□□ -0.37
TNFRSF8-203ENST00000417814 DUSP26Q9BV47 211 aa12.77□□□□□ -0.37
TNFRSF8-203ENST00000417814 RIOK2Q9BVS4 552 aaKnown RBP12.77□□□□□ -0.37
TNFRSF8-203ENST00000417814 DCAF13Q9NV06 445 aaKnown RBP12.77□□□□□ -0.37
TNFRSF8-203ENST00000417814 THG1LQ9NWX6 298 aaKnown RBP12.77□□□□□ -0.37
TNFRSF8-203ENST00000417814 ILVBLA1L0T0 632 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 C5orf58C9J3I9 102 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 OR10H3O60404 316 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 ACRP10323 421 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 GSTM2P28161 218 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 ATP6V1E1P36543 226 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 TMBIM6P55061 237 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 CAV3P56539 151 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 ARPC4P59998 168 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 HTRA3P83110 453 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 ST3GAL4Q11206 333 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 LMAN2Q12907 356 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 SLC14A2Q15849 920 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 NIPAL1Q6NVV3 410 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 IQCF1Q8N6M8 205 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 CENPOQ9BU64 300 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 EHD1Q9H4M9 534 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 EQTNQ9NQ60 294 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 MIEF1Q9NQG6 463 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 LOC110117498-PIK3R3F6TDL0 507 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 H0YJX3 145 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 IGSF6O95976 241 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 KLK1P06870 262 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 TUFMP49411 452 aaKnown RBP12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 CPZQ66K79 652 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 NCEH1Q6PIU2 408 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 PTCHD4Q6ZW05 846 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 LGI4Q8N135 537 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 NXPE1Q8N323 547 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 UROC1Q96N76 676 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 BRINP2Q9C0B6 783 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 SLC32A1Q9H598 525 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 HCFC1R1Q9NWW0 138 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 MS4A12Q9NXJ0 267 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 YIPF1Q9Y548 306 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 SEC16AO15027 2179 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 FAM155AB1AL88 458 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 TAF4O00268 1085 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 CCNKO75909 580 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 HLA-EP13747 358 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 SPNP16150 400 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 HOXB8P17481 243 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 SOX3P41225 446 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 PSMD8P48556 350 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 SLC16A1P53985 500 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 MLLT1Q03111 559 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 ABHD18Q0P651 414 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 CRTC1Q6UUV9 634 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 C17orf99Q6UX52 265 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 B3GLCTQ6Y288 498 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 ZNF420Q8TAQ5 688 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 PHF10Q8WUB8 498 aaKnown RBP12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 SOCS4Q8WXH5 440 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 EXOSC8Q96B26 276 aaKnown RBP12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 ZNF347Q96SE7 839 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 TSPAN18Q96SJ8 248 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 CCM2Q9BSQ5 444 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 PDFQ9HBH1 243 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 DNAJC11Q9NVH1 559 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 TBC1D14Q9P2M4 693 aa12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 LSM7Q9UK45 103 aaKnown RBP12.76□□□□□ -0.37
TNFRSF8-203ENST00000417814 YY2O15391 372 aa12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 TSPAN6O43657 245 aa12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 HYAL3O43820 417 aaPredicted RBP12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 ERAL1O75616 437 aaKnown RBP12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 SEC14L2O76054 403 aa12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 SLC16A8O95907 504 aa12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 PABPC1P11940 636 aaKnown RBP12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 NAT1P18440 290 aa12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 NPRL3Q12980 569 aa12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 DOC2AQ14183 400 aa12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 CLEC12AQ5QGZ9 265 aa12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 RBM48Q5RL73 367 aaKnown RBP12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 RNF130Q86XS8 419 aa12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 PCSK9Q8NBP7 692 aaKnown RBP12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 SETD9Q8NE22 299 aa12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 GPR150Q8NGU9 434 aa12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 XAGE5Q8WWM1 108 aa12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 MRPS31Q92665 395 aaKnown RBP12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 CLIP3Q96DZ5 547 aa12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 RNF31Q96EP0 1072 aa12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 SAMD11Q96NU1 681 aa12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 MARCH5Q9NX47 278 aa12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 KIAA1522Q9P206 1035 aaPredicted RBP12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 CHD7Q9P2D1 2997 aa12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 OR6C75A6NL08 312 aa12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 GFRA2O00451 464 aa12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 AP3D1O14617 1153 aa12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 PCDH17O14917 1159 aa12.75□□□□□ -0.37
TNFRSF8-203ENST00000417814 ASNA1O43681 348 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms