RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 AGO1Q9UL18 857 aaKnown RBP12.56□□□□□ -0.4
PTPRN-202ENST00000409251 MAU2Q9Y6X3 613 aa12.56□□□□□ -0.4
PTPRN-202ENST00000409251 A0A1W2PQ09 198 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 FAM25AB3EWG3 89 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 FAM25CB3EWG5 89 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 FAM25GB3EWG6 89 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 PITPNM1O00562 1244 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 INPPL1O15357 1258 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 CXCL14O95715 111 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 PTHP01270 115 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 RHOQP17081 205 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 S100A3P33764 101 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 FEN1P39748 380 aaKnown RBP12.55□□□□□ -0.4
PTPRN-202ENST00000409251 P2RX3P56373 397 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 MRPL28Q13084 256 aaKnown RBP12.55□□□□□ -0.4
PTPRN-202ENST00000409251 RFX4Q33E94 735 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 Q6ZSR9 355 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 SPATA19Q7Z5L4 167 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 RNF175Q8N4F7 328 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 LRRC20Q8TCA0 184 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 POF1BQ8WVV4 589 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 MAL2Q969L2 176 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 ARID1AO14497 2285 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 SLC35F4A4IF30 521 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 ERVH48-1M5A8F1 160 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 KPNA5O15131 536 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 STC2O76061 302 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 HCAR3P49019 387 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 SRP54P61011 504 aaKnown RBP12.55□□□□□ -0.4
PTPRN-202ENST00000409251 SLC35A2P78381 396 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 GANABQ14697 944 aaKnown RBP12.55□□□□□ -0.4
PTPRN-202ENST00000409251 ZMYND11Q15326 602 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 C8orf82Q6P1X6 216 aaPredicted RBP12.55□□□□□ -0.4
PTPRN-202ENST00000409251 LAX1Q8IWV1 398 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 RIMKLAQ8IXN7 391 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 CLDN19Q8N6F1 224 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 IL17RDQ8NFM7 739 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 PHF10Q8WUB8 498 aaKnown RBP12.55□□□□□ -0.4
PTPRN-202ENST00000409251 TRIM62Q9BVG3 475 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 FBXO8Q9NRD0 319 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 MRPL17Q9NRX2 175 aaKnown RBP12.55□□□□□ -0.4
PTPRN-202ENST00000409251 MUTYHQ9UIF7 546 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 PCDHB9Q9Y5E1 797 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 RFXANKO14593 260 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 ALX3O95076 343 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 PTTG1O95997 202 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 ALPIP09923 528 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 AIF1P55008 147 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 CAV3P56539 151 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 ELAVL2Q12926 359 aaKnown RBP12.55□□□□□ -0.4
PTPRN-202ENST00000409251 OR2T5Q6IEZ7 315 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 DLEU7Q6UYE1 221 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 C16orf62Q7Z3J2 963 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 LSRQ86X29 649 aaPredicted RBP12.55□□□□□ -0.4
PTPRN-202ENST00000409251 ZFAND4Q86XD8 727 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 PHYKPLQ8IUZ5 450 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 OR6C4Q8NGE1 309 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 OR2T29Q8NH02 315 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 OTULINQ96BN8 352 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 COQ8BQ96D53 544 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 EGLN2Q96KS0 407 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 OR5M11Q96RB7 305 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 CDADC1Q9BWV3 514 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 SYTL2Q9HCH5 934 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 TREX1Q9NSU2 369 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 ZNF225Q9UK10 706 aa12.55□□□□□ -0.4
PTPRN-202ENST00000409251 HIDE1A8MVS5 230 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 HOXA2O43364 376 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 VPS26AO75436 327 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 YES1P07947 543 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 POLR2EP19388 210 aaKnown RBP12.54□□□□□ -0.4
PTPRN-202ENST00000409251 HNF4AP41235 474 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 HOXC5Q00444 222 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 MRPL58Q14197 206 aaKnown RBP12.54□□□□□ -0.4
PTPRN-202ENST00000409251 ZNF284Q2VY69 593 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 ARMC12Q5T9G4 340 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 ZNF57Q68EA5 555 aaPredicted RBP12.54□□□□□ -0.4
PTPRN-202ENST00000409251 RANBP10Q6VN20 620 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 GLT6D1Q7Z4J2 308 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 PHC2Q8IXK0 858 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 OR9Q1Q8NGQ5 310 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 APOLD1Q96LR9 279 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 PANX1Q96RD7 426 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 CDCP1Q9H5V8 836 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 C8orf4Q9NR00 106 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 THUMPD1Q9NXG2 353 aaKnown RBP12.54□□□□□ -0.4
PTPRN-202ENST00000409251 COMMD3Q9UBI1 195 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 SLC9A8Q9Y2E8 581 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 BRWD1Q9NSI6 2320 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 SYNDIG1LA6NDD5 238 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 LZTS3O60299 673 aaPredicted RBP12.54□□□□□ -0.4
PTPRN-202ENST00000409251 MATN4O95460 622 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 CD6P30203 668 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 TNFSF8P32971 234 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 PIK3CBP42338 1070 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 IL2P60568 153 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 Q5BKY6 102 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 PTRHD1Q6GMV3 140 aaKnown RBP12.54□□□□□ -0.4
PTPRN-202ENST00000409251 PLET1Q6UQ28 207 aa12.54□□□□□ -0.4
PTPRN-202ENST00000409251 IQCF2Q8IXL9 164 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms