RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 IGFN1Q86VF2 1251 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 POGLUT1Q8NBL1 392 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 AQP11Q8NBQ7 271 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 STRA6Q9BX79 667 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 IL1RAPQ9NPH3 570 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 ZDHHC2Q9UIJ5 367 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 LRRC10BA6NIK2 292 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 A8MV72 311 aaPredicted RBP13.37□□□□□ -0.27
VAPA-202ENST00000400000 TEX46H3BTG2 121 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 LEFTY2O00292 366 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 CCNHP51946 323 aaPredicted RBP13.37□□□□□ -0.27
VAPA-202ENST00000400000 CDH15P55291 814 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 RPS3AP61247 264 aaKnown RBP13.37□□□□□ -0.27
VAPA-202ENST00000400000 LASP1Q14847 261 aaKnown RBP13.37□□□□□ -0.27
VAPA-202ENST00000400000 LRRC37A5PQ49AS3 106 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 LY6G5CQ5SRR4 150 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 GKN2Q86XP6 184 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 FBXL16Q8N461 479 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 ZSCAN1Q8NBB4 408 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 OR1F2PQ96R84 312 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 ZNF700Q9H0M5 742 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 MYEF2Q9P2K5 600 aaKnown RBP13.37□□□□□ -0.27
VAPA-202ENST00000400000 EI24O14681 340 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 ASLP04424 464 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 ATF4P18848 351 aaPredicted RBP13.37□□□□□ -0.27
VAPA-202ENST00000400000 BLMHQ13867 455 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 KHDC1Q4VXA5 237 aaKnown RBP13.37□□□□□ -0.27
VAPA-202ENST00000400000 NUDT13Q86X67 352 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 SRRDQ9UH36 339 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 GOLGA4Q13439 2230 aaKnown RBP13.37□□□□□ -0.27
VAPA-202ENST00000400000 PRKD3O94806 890 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 TUBG1P23258 451 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 DSC3Q14574 896 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 NCBP2-AS2Q69YL0 99 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 GOLGA7Q7Z5G4 137 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 CCDC116Q8IYX3 515 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 CASTOR1Q8WTX7 329 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 CNTN5O94779 1100 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 CSNK2A2P19784 350 aaPredicted RBP13.37□□□□□ -0.27
VAPA-202ENST00000400000 SOX2P48431 317 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 ATXN7L3Q14CW9 347 aaPredicted RBP13.37□□□□□ -0.27
VAPA-202ENST00000400000 EIF2S3LQ2VIR3 472 aaKnown RBP13.37□□□□□ -0.27
VAPA-202ENST00000400000 INAVAQ3KP66 663 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 FAM92BQ6ZTR7 304 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 OR4K1Q8NGD4 311 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 MAPK15Q8TD08 544 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 TFGQ92734 400 aaPredicted RBP13.37□□□□□ -0.27
VAPA-202ENST00000400000 NXPE2Q96DL1 559 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 MAGEE1Q9HCI5 957 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 SMCO3A2RU48 225 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 M0R036 132 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 TSTQ16762 297 aaKnown RBP13.36□□□□□ -0.27
VAPA-202ENST00000400000 OR2L2Q8NH16 312 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 ANKRD27Q96NW4 1050 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 EHD1Q9H4M9 534 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 GRHPRQ9UBQ7 328 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 FXYD6-FXYD2A0A087WZ82 144 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 A0A1B0GV50 99 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 OR6C74A6NCV1 312 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 H7BY64 318 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 SEC14L5O43304 696 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 SPARCP09486 303 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 FAM69BQ5VUD6 431 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 LGI4Q8N135 537 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 KLHL36Q8N4N3 616 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 TCEANCQ8N8B7 351 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 PRAP1Q96NZ9 151 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 FXYD6Q9H0Q3 95 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 CNTN6Q9UQ52 1028 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 SPEF1Q9Y4P9 236 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 OTX2P32243 289 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 JAM2P57087 298 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 IQCCQ4KMZ1 466 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 ADGRF1Q5T601 910 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 IRF2BP1Q8IU81 584 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 ZNF565Q8N9K5 539 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 MFSD2AQ8NA29 543 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 ZNF471Q9BX82 626 aaPredicted RBP13.36□□□□□ -0.27
VAPA-202ENST00000400000 CYTH4Q9UIA0 394 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 GJD2Q9UKL4 321 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 SYNPO2Q9UMS6 1093 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 RFPL2O75678 378 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 RGS19P49795 217 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 THOC7Q6I9Y2 204 aaKnown RBP13.36□□□□□ -0.27
VAPA-202ENST00000400000 KANSL1Q7Z3B3 1105 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 ADGRD2Q7Z7M1 963 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 OR4F6Q8NGB9 312 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 TWNKQ96RR1 684 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 SLC5A7Q9GZV3 580 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 HRASLS2Q9NWW9 162 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 FAM170BA6NMN3 283 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 M0R2N6 131 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 TLR4O00206 839 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 TRMUO75648 421 aaKnown RBP13.36□□□□□ -0.27
VAPA-202ENST00000400000 RPLP0P05388 317 aaKnown RBP13.36□□□□□ -0.27
VAPA-202ENST00000400000 CCNFP41002 786 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 AP3S2P59780 193 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 HYAL4Q2M3T9 481 aa13.36□□□□□ -0.27
VAPA-202ENST00000400000 ZNF776Q68DI1 518 aaPredicted RBP13.36□□□□□ -0.27
VAPA-202ENST00000400000 RNF130Q86XS8 419 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms