RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 ZNF8P17098 575 aaPredicted RBP16.18■□□□□ 0.18
NUP50-202ENST00000396096 KDELR2P33947 212 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 TAP2Q03519 686 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 PDGFRLQ15198 375 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 SF1Q15637 639 aaKnown RBP16.18■□□□□ 0.18
NUP50-202ENST00000396096 ZNF773Q6PK81 442 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 ADGRD2Q7Z7M1 963 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 RBM23Q86U06 439 aaKnown RBP16.18■□□□□ 0.18
NUP50-202ENST00000396096 HS3ST5Q8IZT8 346 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 TERB1Q8NA31 727 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 SETD7Q8WTS6 366 aaKnown RBP16.18■□□□□ 0.18
NUP50-202ENST00000396096 HDAC2Q92769 488 aaKnown RBP16.18■□□□□ 0.18
NUP50-202ENST00000396096 RAB7BQ96AH8 199 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 SH3KBP1Q96B97 665 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 CNDP2Q96KP4 475 aaKnown RBP16.18■□□□□ 0.18
NUP50-202ENST00000396096 TUBA1CQ9BQE3 449 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 TPT1P8Q9HAU6 139 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 TRPV4Q9HBA0 871 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 TM9SF3Q9HD45 589 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 C3orf18Q9UK00 162 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 MGAT4DA6NG13 374 aa16.17■□□□□ 0.18
NUP50-202ENST00000396096 RNASET2O00584 256 aaKnown RBP16.17■□□□□ 0.18
NUP50-202ENST00000396096 PCDH7O60245 1069 aa16.17■□□□□ 0.18
NUP50-202ENST00000396096 CPNE6O95741 557 aa16.17■□□□□ 0.18
NUP50-202ENST00000396096 MYOGP15173 224 aa16.17■□□□□ 0.18
NUP50-202ENST00000396096 JUNBP17275 347 aaPredicted RBP16.17■□□□□ 0.18
NUP50-202ENST00000396096 KCNAB2Q13303 367 aa16.17■□□□□ 0.18
NUP50-202ENST00000396096 SLBPQ14493 270 aaKnown RBP eCLIP16.17■□□□□ 0.18
NUP50-202ENST00000396096 RBBP5Q15291 538 aaKnown RBP16.17■□□□□ 0.18
NUP50-202ENST00000396096 HKDC1Q2TB90 917 aa16.17■□□□□ 0.18
NUP50-202ENST00000396096 CATSPEREQ5SY80 951 aa16.17■□□□□ 0.18
NUP50-202ENST00000396096 ADAMTSL4Q6UY14 1074 aa16.17■□□□□ 0.18
NUP50-202ENST00000396096 CBLL1Q75N03 491 aa16.17■□□□□ 0.18
NUP50-202ENST00000396096 EIF3MQ7L2H7 374 aaKnown RBP16.17■□□□□ 0.18
NUP50-202ENST00000396096 C11orf96Q7Z7L8 435 aa16.17■□□□□ 0.18
NUP50-202ENST00000396096 ZNF420Q8TAQ5 688 aaPredicted RBP16.17■□□□□ 0.18
NUP50-202ENST00000396096 COX14Q96I36 57 aa16.17■□□□□ 0.18
NUP50-202ENST00000396096 HIC2Q96JB3 615 aa16.17■□□□□ 0.18
NUP50-202ENST00000396096 ZDHHC5Q9C0B5 715 aa16.17■□□□□ 0.18
NUP50-202ENST00000396096 BHLHE41Q9C0J9 482 aaPredicted RBP16.17■□□□□ 0.18
NUP50-202ENST00000396096 ING2Q9H160 280 aa16.17■□□□□ 0.18
NUP50-202ENST00000396096 MTIF3Q9H2K0 278 aaKnown RBP16.17■□□□□ 0.18
NUP50-202ENST00000396096 TIMMDC1Q9NPL8 285 aa16.17■□□□□ 0.18
NUP50-202ENST00000396096 DMRT3Q9NQL9 472 aa16.17■□□□□ 0.18
NUP50-202ENST00000396096 DYRK4Q9NR20 520 aa16.17■□□□□ 0.18
NUP50-202ENST00000396096 TMEFF2Q9UIK5 374 aaPredicted RBP16.17■□□□□ 0.18
NUP50-202ENST00000396096 EXO1Q9UQ84 846 aaKnown RBP16.17■□□□□ 0.18
NUP50-202ENST00000396096 SH2B3Q9UQQ2 575 aa16.17■□□□□ 0.18
NUP50-202ENST00000396096 PIPSLA2A3N6 862 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 PLK4O00444 970 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 SLC16A6O15403 523 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 NOBOXO60393 691 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 E2F6O75461 281 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 ELK4P28324 431 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 ZNF763Q0D2J5 394 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 RPA4Q13156 261 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 IL18R1Q13478 541 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 SPIDRQ14159 915 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 HIST2H2ACQ16777 129 aaPredicted RBP16.16■□□□□ 0.18
NUP50-202ENST00000396096 LRRC23Q53EV4 343 aaPredicted RBP16.16■□□□□ 0.18
NUP50-202ENST00000396096 HIST2H2AA3Q6FI13 130 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 ANKRD26P1Q6NSI1 321 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 NXPE4Q6UWF7 544 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 TMC5Q6UXY8 1006 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 TRMT11Q7Z4G4 463 aaKnown RBP16.16■□□□□ 0.18
NUP50-202ENST00000396096 DSG4Q86SJ6 1040 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 DCP2Q8IU60 420 aaKnown RBP16.16■□□□□ 0.18
NUP50-202ENST00000396096 ARL10Q8N8L6 244 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 GOT1L1Q8NHS2 421 aaPredicted RBP16.16■□□□□ 0.18
NUP50-202ENST00000396096 CDC26Q8NHZ8 85 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 ZFP90Q8TF47 636 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 SLC5A11Q8WWX8 675 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 SAMD11Q96NU1 681 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 DOK1Q99704 481 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 OR52A5Q9H2C5 316 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 VNN3Q9NY84 501 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 C1QTNF3-AMACRE9PGA6 284 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 DPM1O60762 260 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 ZNF682O95780 498 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 ITGAMP11215 1152 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 PIGAP37287 484 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 PIK3CBP42338 1070 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 RAD23AP54725 363 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 PMS2P3Q13401 168 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 GPM6BQ13491 265 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 PDE7AQ13946 482 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 STARD3Q14849 445 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 OR2T5Q6IEZ7 315 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 KCTD8Q6ZWB6 473 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 PIWIL3Q7Z3Z3 882 aaKnown RBP16.16■□□□□ 0.18
NUP50-202ENST00000396096 CLVS1Q8IUQ0 354 aaPredicted RBP16.16■□□□□ 0.18
NUP50-202ENST00000396096 SFTPA1Q8IWL2 248 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 OR2T29Q8NH02 315 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 CXorf40AQ8TE69 158 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 FGF13Q92913 245 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 ISOC1Q96CN7 298 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 REEP4Q9H6H4 257 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 SFXN1Q9H9B4 322 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 POLR1BQ9H9Y6 1135 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 CCDC177Q9NQR7 707 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms