RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 TSC22D2O75157 780 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 TNFRSF21O75509 655 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 WDR47O94967 919 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 DDCP20711 480 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 RORCP51449 518 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 PURAQ00577 322 aaKnown RBP14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 RGS1Q08116 209 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 DOC2BQ14184 412 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 GALEQ14376 348 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 SEMA3AQ14563 771 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 PLET1Q6UQ28 207 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 ZNF782Q6ZMW2 699 aaPredicted RBP14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 METTL6Q8TCB7 284 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 HASPINQ8TF76 798 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 TBATAQ96M53 351 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 UQCC2Q9BRT2 126 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 AARSD1Q9BTE6 412 aaKnown RBP14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 ULBP1Q9BZM6 244 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 TMEM245Q9H330 911 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 TMEM30AQ9NV96 361 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 EIF2B4Q9UI10 523 aaKnown RBP14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 CMAHPQ9Y471 501 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 E2F3O00716 465 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 PGRP06401 933 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 AKR1A1P14550 325 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 NPR3P17342 541 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 CXCR3P49682 368 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 CRYBB1P53674 252 aaPredicted RBP14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 DSTNP60981 165 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 MAB21L1Q13394 359 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 BRAT1Q6PJG6 821 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 PAQR9Q6ZVX9 377 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 CDH24Q86UP0 819 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 CAMKK1Q8N5S9 505 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 GDPD1Q8N9F7 314 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 C3orf58Q8NDZ4 430 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 ZNF680Q8NEM1 530 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 OR10Z1Q8NGY1 313 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 BTN2A2Q8WVV5 523 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 TAPBPLQ9BX59 468 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 SLC39A8Q9C0K1 460 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 ERVMER34-1Q9H9K5 563 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 THUMPD1Q9NXG2 353 aaKnown RBP14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 ATPIF1Q9UII2 106 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 TTC3P53804 2025 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 LCHNA4D1U4 455 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 H3BM21 787 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 SEMG1P04279 462 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 FABP3P05413 133 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 COL6A1P12109 1028 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 PRKAR2AP13861 404 aaKnown RBP14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 RPS3P23396 243 aaKnown RBP eCLIP14.18□□□□□ -0.147e-7■■■■□ 25.3
VPS9D1-201ENST00000389386 INO80DQ53TQ3 878 aaPredicted RBP14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 MFSD14CQ5VZR4 134 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 TEX261Q6UWH6 196 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 KIF18BQ86Y91 864 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 OR8H3Q8N146 312 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 VANGL1Q8TAA9 524 aaPredicted RBP14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 GPR152Q8TDT2 470 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 HYLS1Q96M11 299 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 GPR137Q96N19 417 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 ST3GAL5Q9UNP4 418 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 NEU3Q9UQ49 428 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 U3KQ87 197 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 RALGAPA2Q2PPJ7 1873 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 NPEPPSL1A6NEC2 478 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 WASHC1A8K0Z3 465 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 BTN3A3O00478 584 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 NDUFA2O43678 99 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 CCNDBP1O95273 360 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 IL6P05231 212 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 ADRA2AP08913 450 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 CYBAP13498 195 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 SLC2A4P14672 509 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 GPC1P35052 558 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 TGM4P49221 684 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 ALDH6A1Q02252 535 aaKnown RBP14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 RIN1Q13671 783 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 MED22Q15528 200 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 LRRC66Q68CR7 880 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 GDF6Q6KF10 455 aaPredicted RBP14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 GPRIN1Q7Z2K8 1008 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 SPNS1Q9H2V7 528 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 TRIM45Q9H8W5 580 aaPredicted RBP14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 REEP1Q9H902 201 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 SNTG1Q9NSN8 517 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 MCUBQ9NWR8 336 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 ZNF226Q9NYT6 803 aa14.18□□□□□ -0.14
VPS9D1-201ENST00000389386 MYBPHLA2RUH7 354 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 TOR1AO14656 332 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 GLP2RO95838 553 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 HOXD4P09016 255 aaPredicted RBP14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 KCNE1P15382 129 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 GABRB1P18505 474 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 DAOAP59103 153 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 TEKQ02763 1124 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 SV2CQ496J9 727 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 PDZK1Q5T2W1 519 aa14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 KIAA1324Q6UXG2 1013 aaKnown RBP14.17□□□□□ -0.14
VPS9D1-201ENST00000389386 PRSS42Q7Z5A4 293 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms