RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 MTERF1Q99551 399 aaKnown RBP13.78□□□□□ -0.2
CLCN4-201ENST00000380829 OSBPL10Q9BXB5 764 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 TRIM15Q9C019 465 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 ASIC5Q9NY37 505 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 MSRAQ9UJ68 235 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 RNF103-CHMP3A0A140T963 221 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 MID1O15344 667 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 LRATO95237 230 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 NPPAP01160 153 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 EEFSECP57772 596 aaKnown RBP13.78□□□□□ -0.2
CLCN4-201ENST00000380829 OR4D2P58180 307 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 DPTQ07507 201 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 PWP1Q13610 501 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 GTF2H3Q13889 308 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 DOC2AQ14183 400 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 NFE2L1Q14494 772 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 SPCS2Q15005 226 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 MAPKAPK3Q16644 382 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 PIP5KL1Q5T9C9 394 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 TRMT11Q7Z4G4 463 aaKnown RBP13.78□□□□□ -0.2
CLCN4-201ENST00000380829 CHPFQ8IZ52 775 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 ATL1Q8WXF7 558 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 SNX19Q92543 992 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 GTF2H4Q92759 462 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 SH3YL1Q96HL8 342 aaPredicted RBP13.78□□□□□ -0.2
CLCN4-201ENST00000380829 EFHD1Q9BUP0 239 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 EBPLQ9BY08 206 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 EPHX3Q9H6B9 360 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 TRIM39Q9HCM9 518 aa13.78□□□□□ -0.2
CLCN4-201ENST00000380829 GRXCR2A6NFK2 248 aa13.77□□□□□ -0.21
CLCN4-201ENST00000380829 AQP12BA6NM10 295 aa13.77□□□□□ -0.21
CLCN4-201ENST00000380829 POP7O75817 140 aaKnown RBP13.77□□□□□ -0.21
CLCN4-201ENST00000380829 C1orf105O95561 183 aa13.77□□□□□ -0.21
CLCN4-201ENST00000380829 EEF1B2P24534 225 aaKnown RBP13.77□□□□□ -0.21
CLCN4-201ENST00000380829 DRD3P35462 400 aa13.77□□□□□ -0.21
CLCN4-201ENST00000380829 INPP5AQ14642 412 aa13.77□□□□□ -0.21
CLCN4-201ENST00000380829 CYP51A1Q16850 503 aa13.77□□□□□ -0.21
CLCN4-201ENST00000380829 TBCELQ5QJ74 424 aa13.77□□□□□ -0.21
CLCN4-201ENST00000380829 ADNP2Q6IQ32 1131 aa13.77□□□□□ -0.21
CLCN4-201ENST00000380829 USP43Q70EL4 1123 aa13.77□□□□□ -0.21
CLCN4-201ENST00000380829 ERMP1Q7Z2K6 904 aa13.77□□□□□ -0.21
CLCN4-201ENST00000380829 AQP12AQ8IXF9 295 aa13.77□□□□□ -0.21
CLCN4-201ENST00000380829 AADATQ8N5Z0 425 aa13.77□□□□□ -0.21
CLCN4-201ENST00000380829 SGCDQ92629 289 aa13.77□□□□□ -0.21
CLCN4-201ENST00000380829 MRPL38Q96DV4 380 aaKnown RBP13.77□□□□□ -0.21
CLCN4-201ENST00000380829 EGLN2Q96KS0 407 aa13.77□□□□□ -0.21
CLCN4-201ENST00000380829 OR52E6Q96RD3 313 aa13.77□□□□□ -0.21
CLCN4-201ENST00000380829 ZNF347Q96SE7 839 aa13.77□□□□□ -0.21
CLCN4-201ENST00000380829 HDAC8Q9BY41 377 aa13.77□□□□□ -0.21
CLCN4-201ENST00000380829 RAD21L1Q9H4I0 556 aa13.77□□□□□ -0.21
CLCN4-201ENST00000380829 PRM3Q9NNZ6 103 aa13.77□□□□□ -0.21
CLCN4-201ENST00000380829 CCM2LQ9NUG4 571 aaPredicted RBP13.77□□□□□ -0.21
CLCN4-201ENST00000380829 OAZ3Q9UMX2 235 aa13.77□□□□□ -0.21
CLCN4-201ENST00000380829 STON1Q9Y6Q2 735 aa13.77□□□□□ -0.21
CLCN4-201ENST00000380829 V9GYQ6 96 aa13.77□□□□□ -0.21
CLCN4-201ENST00000380829 IGLON5A6NGN9 336 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 CLDN25C9JDP6 229 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 SH3BGRLO75368 114 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 B3GALT4O96024 378 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 PCCBP05166 539 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 SDC1P18827 310 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 PSMA4P25789 261 aaKnown RBP13.76□□□□□ -0.21
CLCN4-201ENST00000380829 ELK4P28324 431 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 SEC13P55735 322 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 AQP6Q13520 282 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 SPATS1Q496A3 300 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 GTDC1Q4AE62 458 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 LIPJQ5W064 366 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 ABRAXAS1Q6UWZ7 409 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 PTRH1Q86Y79 214 aaKnown RBP13.76□□□□□ -0.21
CLCN4-201ENST00000380829 SYTL1Q8IYJ3 562 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 MFSD2AQ8NA29 543 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 GLB1L3Q8NCI6 653 aaPredicted RBP13.76□□□□□ -0.21
CLCN4-201ENST00000380829 CMTM7Q96FZ5 175 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 LHPPQ9H008 270 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 TMEM9Q9P0T7 183 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 ANKMY1Q9P2S6 941 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.76□□□□□ -0.21
CLCN4-201ENST00000380829 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.76□□□□□ -0.21
CLCN4-201ENST00000380829 EI24O14681 340 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 IL6P05231 212 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 BMP2P12643 396 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 AMD1P17707 334 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 TGM1P22735 817 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 HRH2P25021 359 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 PHC1P78364 1004 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 SF1Q15637 639 aaKnown RBP13.76□□□□□ -0.21
CLCN4-201ENST00000380829 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.76□□□□□ -0.21
CLCN4-201ENST00000380829 FAM83HQ6ZRV2 1179 aaPredicted RBP13.76□□□□□ -0.21
CLCN4-201ENST00000380829 HEATR4Q86WZ0 1026 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 ANKRD13BQ86YJ7 626 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 ADGRG5Q8IZF4 528 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 OR56A3Q8NH54 315 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 ZNF480Q8WV37 535 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 IKZF5Q9H5V7 419 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 ARMC1Q9NVT9 282 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 IFT80Q9P2H3 777 aaPredicted RBP13.76□□□□□ -0.21
CLCN4-201ENST00000380829 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.76□□□□□ -0.21
CLCN4-201ENST00000380829 SERGEFQ9UGK8 458 aa13.76□□□□□ -0.21
CLCN4-201ENST00000380829 ATG2BQ96BY7 2078 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms