RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 MAPK9P45984 424 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 EEFSECP57772 596 aaKnown RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 SEMA3AQ14563 771 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 FAM91A1Q658Y4 838 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 CYS1Q717R9 158 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 LYSMD3Q7Z3D4 306 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 OR6C4Q8NGE1 309 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 RHEBL1Q8TAI7 183 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 TRMT61BQ9BVS5 477 aaKnown RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 MFSD1Q9H3U5 465 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 ELL3Q9HB65 397 aaPredicted RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 A0A1W2PPK0 400 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 GABRDO14764 452 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 C7P10643 843 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 BMP2P12643 396 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 CLDN10P78369 228 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 INCA1Q0VD86 236 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 SMCO1Q147U7 214 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 SPHARQ15513 63 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 DPY19L1Q2PZI1 675 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 ZNF782Q6ZMW2 699 aaPredicted RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 PIWIL3Q7Z3Z3 882 aaKnown RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 VTCN1Q7Z7D3 282 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 OR8J3Q8NGG0 315 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 C9orf43Q8TAL5 461 aaPredicted RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 GPER1Q99527 375 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 POLR2J3Q9H1A7 115 aaKnown RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 BEX1Q9HBH7 125 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 TCF7L1Q9HCS4 588 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 NANSQ9NR45 359 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 HPF1Q9NWY4 346 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 AKAP8O43823 692 aaKnown RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 REM1O75628 298 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 DNAJB5O75953 348 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 IFNA6P05013 189 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 ZNF3P17036 446 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 HTR1EP28566 365 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 CD97P48960 835 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 CREMQ03060 361 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 CBX2Q14781 532 aaPredicted RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 BTBD16Q32M84 506 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 FAM214AQ32MH5 1076 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 DUSP28Q4G0W2 176 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 MPPE1Q53F39 396 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 ULK3Q6PHR2 472 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 HS3ST5Q8IZT8 346 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 TOMM5Q8N4H5 51 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 RNASE11Q8TAA1 199 aaKnown RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 MAGEH1Q9H213 219 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 TP63Q9H3D4 680 aaPredicted RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 POLR1DQ9Y2S0 133 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 MED31Q9Y3C7 131 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 CFAP20Q9Y6A4 193 aaKnown RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 CEP350Q5VT06 3117 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 ATE1O95260 518 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 TACR2P21452 398 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 APLP1P51693 650 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 KCNJ8Q15842 424 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 SPIN4Q56A73 249 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 LCN8Q6JVE9 175 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 SNX20Q7Z614 316 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 TP53INP2Q8IXH6 220 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 C1orf52Q8N6N3 182 aaKnown RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 AP2M1Q96CW1 435 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 PPP1R16AQ96I34 528 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 COL21A1Q96P44 957 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 CPNE5Q9HCH3 593 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 KCTD3Q9Y597 815 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 ALS2Q96Q42 1657 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 PHIPQ8WWQ0 1821 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 OR14I1A6ND48 311 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 BHMG1C9JSJ3 638 aaPredicted RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 OR7A10O76100 309 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 CRYZL1O95825 349 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 RPS3P23396 243 aaKnown RBP eCLIP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 PDHA2P29803 388 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 LCN1P31025 176 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 SLC6A4P31645 630 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 NR4A2P43354 598 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 CDKN2DP55273 166 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 PPIGQ13427 754 aaKnown RBP eCLIP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 GRB14Q14449 540 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 C11orf91Q3C1V1 193 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 FAM217AQ8IXS0 508 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 OR5J2Q8NH18 312 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 ZFP90Q8TF47 636 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 ASB12Q8WXK4 309 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 ZNF599Q96NL3 588 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 CCDC32Q9BV29 185 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 RSPH9Q9H1X1 276 aaPredicted RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 POU2F3Q9UKI9 436 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 ERVK-11Q9UQG0 969 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 PCDHGB5Q9Y5G0 923 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 HS3ST4Q9Y661 456 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 DNMT3AQ9Y6K1 912 aaPredicted RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 SMAD9O15198 467 aaKnown RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 LRP8Q14114 963 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 OR4D1Q15615 310 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 LRRC37A5PQ49AS3 106 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms