RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 CBLP22681 906 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 MTTPP55157 894 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 BTN3A2P78410 334 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 SPIBQ01892 262 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 FOXM1Q08050 763 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 WSCD2Q2TBF2 565 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 RPS26P11Q5JNZ5 115 aaPredicted RBP7.83□□□□□ -1.16
CKAP2-203ENST00000378037 METTL21CQ5VZV1 264 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 OGFOD2Q6N063 350 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 Q6ZPB1 254 aaPredicted RBP7.83□□□□□ -1.16
CKAP2-203ENST00000378037 FAM83HQ6ZRV2 1179 aaPredicted RBP7.83□□□□□ -1.16
CKAP2-203ENST00000378037 RNF130Q86XS8 419 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 SLC47A1Q96FL8 570 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 PDXPQ96GD0 296 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 POLR1BQ9H9Y6 1135 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 PRSS16Q9NQE7 514 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 ZCCHC3Q9NUD5 404 aaKnown RBP7.83□□□□□ -1.16
CKAP2-203ENST00000378037 SNX5Q9Y5X3 404 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 MAU2Q9Y6X3 613 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 CACNA1AO00555 2505 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 TAPBPO15533 448 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 SGTAO43765 313 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 DEAF1O75398 565 aaPredicted RBP7.82□□□□□ -1.16
CKAP2-203ENST00000378037 IL3P08700 152 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 FAM58BPP0C7Q3 252 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 SLC6A2P23975 617 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 FMO3P31513 532 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 RFC2P35250 354 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 AVPR1BP47901 424 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 KLHDC10Q6PID8 442 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 SMARCD3Q6STE5 483 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 RBM44Q6ZP01 1051 aaKnown RBP7.82□□□□□ -1.16
CKAP2-203ENST00000378037 BEND5Q7L4P6 421 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 ZNF555Q8NEP9 628 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 OR5D16Q8NGK9 328 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 PROKR1Q8TCW9 393 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 NCSTNQ92542 709 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 ZNF689Q96CS4 500 aaPredicted RBP7.82□□□□□ -1.16
CKAP2-203ENST00000378037 RMND5BQ96G75 393 aaPredicted RBP7.82□□□□□ -1.16
CKAP2-203ENST00000378037 IL4I1Q96RQ9 567 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 PDP1Q9P0J1 537 aaPredicted RBP7.82□□□□□ -1.16
CKAP2-203ENST00000378037 C6orf203Q9P0P8 240 aaPredicted RBP7.82□□□□□ -1.16
CKAP2-203ENST00000378037 PCDHGA7Q9Y5G6 932 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 FADS3Q9Y5Q0 445 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 SNX11Q9Y5W9 270 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 GREB1Q4ZG55 1949 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 FAM92AA1XBS5 289 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 MAGEA13PA6NCF6 341 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 FAM227AF5H4B4 570 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 CXCR6O00574 342 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 XPNPEP2O43895 674 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 BCHEP06276 602 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 ANXA6P08133 673 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 ACADSP16219 412 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 HOXB8P17481 243 aaPredicted RBP7.82□□□□□ -1.16
CKAP2-203ENST00000378037 CPOXP36551 454 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 FOXL2P58012 376 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 RPS7P62081 194 aaKnown RBP7.82□□□□□ -1.16
CKAP2-203ENST00000378037 PPP2CBP62714 309 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 PPP2CAP67775 309 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 NKX3-2P78367 333 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 ILF3Q12906 894 aaKnown RBP eCLIP7.82□□□□□ -1.16
CKAP2-203ENST00000378037 TUBB3Q13509 450 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 LILRA6Q6PI73 481 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 ADGRG6Q86SQ4 1221 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 LILRA2Q8N149 483 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 OR7G3Q8NG95 312 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 B4GALNT2Q8NHY0 566 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 OVCA2Q8WZ82 227 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 ATOH1Q92858 354 aaPredicted RBP7.82□□□□□ -1.16
CKAP2-203ENST00000378037 BIRC7Q96CA5 298 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 DOCK7Q96N67 2140 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 SLC17A9Q9BYT1 436 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 FZD4Q9ULV1 537 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 SH2B3Q9UQQ2 575 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 NOTCH4Q99466 2003 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 NPIPA5A0A0B4J1W7 369 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 A0A1W2PP18 115 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 NPIPA7E9PJI5 369 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 OR10H3O60404 316 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 NPIPA8P0DM63 369 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 NT5EP21589 574 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 ELK4P28324 431 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 CARTPTQ16568 116 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 PAGE2BQ5JRK9 111 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 FAM92BQ6ZTR7 304 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 LARP4Q71RC2 724 aaKnown RBP eCLIP7.82□□□□□ -1.162e-6■■□□□ 12.3
CKAP2-203ENST00000378037 NLGN4XQ8N0W4 816 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 TMCO5AQ8N6Q1 288 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 TSTD1Q8NFU3 115 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 ZNF707Q96C28 371 aaPredicted RBP7.82□□□□□ -1.16
CKAP2-203ENST00000378037 CCDC28BQ9BUN5 200 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 BDH2Q9BUT1 245 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 GTPBP2Q9BX10 602 aaKnown RBP7.82□□□□□ -1.16
CKAP2-203ENST00000378037 SPNS1Q9H2V7 528 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 IKZF5Q9H5V7 419 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 MAT2BQ9NZL9 334 aa7.82□□□□□ -1.16
CKAP2-203ENST00000378037 OR6C74A6NCV1 312 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 SLC28A1O00337 649 aa7.81□□□□□ -1.16
CKAP2-203ENST00000378037 SOCS2O14508 198 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms