RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 C12orf43Q96C57 262 aaKnown RBP11.33□□□□□ -0.6
PDE6C-201ENST00000371447 DCAF13Q9NV06 445 aaKnown RBP11.33□□□□□ -0.6
PDE6C-201ENST00000371447 TAC3Q9UHF0 121 aa11.33□□□□□ -0.6
PDE6C-201ENST00000371447 FAF1Q9UNN5 650 aaPredicted RBP11.33□□□□□ -0.6
PDE6C-201ENST00000371447 SH3GLB1Q9Y371 365 aa11.33□□□□□ -0.6
PDE6C-201ENST00000371447 ORC6Q9Y5N6 252 aa11.33□□□□□ -0.6
PDE6C-201ENST00000371447 SLC9A3R1O14745 358 aaPredicted RBP11.33□□□□□ -0.6
PDE6C-201ENST00000371447 CAPNS1P04632 268 aa11.33□□□□□ -0.6
PDE6C-201ENST00000371447 ALPPL2P10696 532 aa11.33□□□□□ -0.6
PDE6C-201ENST00000371447 GAB1Q13480 694 aa11.33□□□□□ -0.6
PDE6C-201ENST00000371447 RAB39AQ14964 217 aa11.33□□□□□ -0.6
PDE6C-201ENST00000371447 SMN1Q16637 294 aaKnown RBP11.33□□□□□ -0.6
PDE6C-201ENST00000371447 COX20Q5RI15 118 aa11.33□□□□□ -0.6
PDE6C-201ENST00000371447 CAPN13Q6MZZ7 669 aaPredicted RBP11.33□□□□□ -0.6
PDE6C-201ENST00000371447 PSRC1Q6PGN9 363 aaPredicted RBP11.33□□□□□ -0.6
PDE6C-201ENST00000371447 XKR5Q6UX68 686 aa11.33□□□□□ -0.6
PDE6C-201ENST00000371447 ADHFE1Q8IWW8 467 aa11.33□□□□□ -0.6
PDE6C-201ENST00000371447 TCAIMQ8N3R3 496 aa11.33□□□□□ -0.6
PDE6C-201ENST00000371447 CXorf40AQ8TE69 158 aa11.33□□□□□ -0.6
PDE6C-201ENST00000371447 PYURFQ96I23 114 aa11.33□□□□□ -0.6
PDE6C-201ENST00000371447 HSH2DQ96JZ2 352 aa11.33□□□□□ -0.6
PDE6C-201ENST00000371447 NDUFA13Q9P0J0 144 aa11.33□□□□□ -0.6
PDE6C-201ENST00000371447 RHCGQ9UBD6 479 aa11.33□□□□□ -0.6
PDE6C-201ENST00000371447 KCNK6Q9Y257 313 aa11.33□□□□□ -0.6
PDE6C-201ENST00000371447 KLHL20Q9Y2M5 609 aa11.33□□□□□ -0.6
PDE6C-201ENST00000371447 PPIL1Q9Y3C6 166 aa11.33□□□□□ -0.6
PDE6C-201ENST00000371447 A0A096LPI6 279 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 H0Y858 1186 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 C1orf105O95561 183 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 NPPAP01160 153 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 PRNPP04156 253 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 PRIM2P49643 509 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 GALK1P51570 392 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 TMED1Q13445 227 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 FGD3Q5JSP0 725 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 TMEM31Q5JXX7 168 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 C9orf64Q5T6V5 341 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 ZDHHC20Q5W0Z9 365 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 MED27Q6P2C8 311 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 DPPA4Q7L190 304 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 ZNF547Q8IVP9 402 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 L3MBTL4Q8NA19 623 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 CSGALNACT1Q8TDX6 532 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 FBXL8Q96CD0 374 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 DTD2Q96FN9 168 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 RBM38Q9H0Z9 239 aaKnown RBP11.32□□□□□ -0.6
PDE6C-201ENST00000371447 IMP3Q9NV31 184 aaKnown RBP11.32□□□□□ -0.6
PDE6C-201ENST00000371447 FAM118AQ9NWS6 357 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 LAMA1P25391 3075 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 ANKRD33BA6NCL7 494 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 GLOD5A6NK44 160 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 H7BY64 318 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 M0R129 80 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 NME6O75414 186 aaPredicted RBP11.32□□□□□ -0.6
PDE6C-201ENST00000371447 SCELO95171 688 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 CISD3P0C7P0 127 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 MPC1LP0DKB6 136 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 ACP5P13686 325 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 CHI3L1P36222 383 aaPredicted RBP11.32□□□□□ -0.6
PDE6C-201ENST00000371447 OCA2Q04671 838 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 CAMK2GQ13555 558 aaPredicted RBP11.32□□□□□ -0.6
PDE6C-201ENST00000371447 KRT33BQ14525 404 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 ZNF385BQ569K4 471 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 PRSS36Q5K4E3 855 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 EGFLAMQ63HQ2 1017 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 COMMD6Q7Z4G1 85 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 NPAS3Q8IXF0 933 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 TNIP2Q8NFZ5 429 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 THAP11Q96EK4 314 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 PRAP1Q96NZ9 151 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 RPP25Q9BUL9 199 aaKnown RBP11.32□□□□□ -0.6
PDE6C-201ENST00000371447 ABCG4Q9H172 646 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 LMCD1Q9NZU5 365 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 A0A1W2PP55 124 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 PPM1DO15297 605 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 MID1O15344 667 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 ATE1O95260 518 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 NPPBP16860 134 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 TIE1P35590 1138 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 PLA2G16P53816 162 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 PTPN5P54829 565 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 CD47Q08722 323 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 TTC23LQ6PF05 361 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 OLIG3Q7RTU3 272 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 C11orf74Q86VG3 221 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 TIFAQ96CG3 184 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 ISOC1Q96CN7 298 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 REXO5Q96IC2 774 aaKnown RBP11.32□□□□□ -0.6
PDE6C-201ENST00000371447 NPLQ9BXD5 320 aaPredicted RBP11.32□□□□□ -0.6
PDE6C-201ENST00000371447 MUC13Q9H3R2 512 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 PTTG2Q9NZH5 202 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 RUVBL1Q9Y265 456 aaKnown RBP11.32□□□□□ -0.6
PDE6C-201ENST00000371447 PLEKHM1Q9Y4G2 1056 aa11.32□□□□□ -0.6
PDE6C-201ENST00000371447 ZNF182P17025 639 aaPredicted RBP11.31□□□□□ -0.6
PDE6C-201ENST00000371447 IGFBP5P24593 272 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 PRLHRP49683 370 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 CLCNKAP51800 687 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 CTU2Q2VPK5 515 aaKnown RBP11.31□□□□□ -0.6
PDE6C-201ENST00000371447 C1orf53Q5VUE5 145 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 GPR153Q6NV75 609 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms