RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 OPALINQ96PE5 141 aa11.71□□□□□ -0.54
SMARCAL1-201ENST00000357276 SMIM14Q96QK8 99 aa11.71□□□□□ -0.54
SMARCAL1-201ENST00000357276 DIABLOQ9NR28 239 aa11.71□□□□□ -0.54
SMARCAL1-201ENST00000357276 WDR70Q9NW82 654 aa11.71□□□□□ -0.54
SMARCAL1-201ENST00000357276 TAS2R16Q9NYV7 291 aa11.71□□□□□ -0.54
SMARCAL1-201ENST00000357276 STMN3Q9NZ72 180 aa11.71□□□□□ -0.54
SMARCAL1-201ENST00000357276 SCML2Q9UQR0 700 aa11.71□□□□□ -0.54
SMARCAL1-201ENST00000357276 LSM2Q9Y333 95 aaKnown RBP11.71□□□□□ -0.54
SMARCAL1-201ENST00000357276 ZNF106Q9H2Y7 1883 aaKnown RBP11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 ZSCAN5BA6NJL1 495 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 LOC730098B7Z3J9 87 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 E5RI56 91 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 CLIC1O00299 241 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 POLR1CO15160 346 aaPredicted RBP11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 SDC1P18827 310 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 EPORP19235 508 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 ITGB7P26010 798 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 HOXD9P28356 352 aaPredicted RBP11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 GDPGP1Q6ZNW5 385 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 ZNF605Q86T29 641 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 RASAL3Q86YV0 1011 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 CCDC28AQ8IWP9 274 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 FAM9CQ8IZT9 166 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 DEPDC4Q8N2C3 294 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 OR4M1Q8NGD0 313 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 GPR152Q8TDT2 470 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 BTN2A2Q8WVV5 523 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 HHATLQ9HCP6 504 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 SNX8Q9Y5X2 465 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 ENGP17813 658 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 GDF5P43026 501 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 RGRP47804 291 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 GZMKP49863 264 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 WNT3P56703 355 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 GRB14Q14449 540 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 ARHGEF6Q15052 776 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 DUOXA1Q1HG43 343 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 PDE12Q6L8Q7 609 aaKnown RBP11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 MON1AQ86VX9 555 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 KRT73Q86Y46 540 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 LAX1Q8IWV1 398 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 MYEOVQ96EZ4 313 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 FCRL1Q96LA6 429 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 PSKH2Q96QS6 385 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 CCM2Q9BSQ5 444 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 TTLL2Q9BWV7 592 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 RUBCNLQ9H714 662 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 NIPAL2Q9H841 368 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 SNX7Q9UNH6 387 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 POFUT2Q9Y2G5 429 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 SH3D21A4FU49 640 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 NT5C1B-RDH14C9J2C7 533 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 TRIM3O75382 744 aaPredicted RBP11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 IGLV3-27P01718 113 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 SCG5P05408 212 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 AP2S1P53680 142 aaPredicted RBP11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 SCN1BQ07699 218 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 FCHO2Q0JRZ9 810 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 TP53BP2Q13625 1128 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 CDONQ4KMG0 1287 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 XKRXQ6PP77 449 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 TMPRSS11AQ6ZMR5 421 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 CIR1Q86X95 450 aaPredicted RBP11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 STK40Q8N2I9 435 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 SLC5A8Q8N695 610 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 EFHBQ8N7U6 833 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 TP53I13Q8NBR0 393 aaPredicted RBP11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 OR5H6Q8NGV6 325 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 BHMTQ93088 406 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 COQ8BQ96D53 544 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 HHIPL1Q96JK4 782 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 SPATA9Q9BWV2 254 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 ASPNQ9BXN1 380 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 TRIM39Q9HCM9 518 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 ABCB8Q9NUT2 735 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 MS4A12Q9NXJ0 267 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 KCNN3Q9UGI6 736 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 SATB2Q9UPW6 733 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 KLHL20Q9Y2M5 609 aa11.7□□□□□ -0.54
SMARCAL1-201ENST00000357276 ARL5CA6NH57 179 aa11.69□□□□□ -0.54
SMARCAL1-201ENST00000357276 CASTOR2A6NHX0 329 aa11.69□□□□□ -0.54
SMARCAL1-201ENST00000357276 TREHO43280 583 aa11.69□□□□□ -0.54
SMARCAL1-201ENST00000357276 PIPP12273 146 aaPredicted RBP11.69□□□□□ -0.54
SMARCAL1-201ENST00000357276 ALDH9A1P49189 494 aa11.69□□□□□ -0.54
SMARCAL1-201ENST00000357276 CSTF3Q12996 717 aaKnown RBP11.69□□□□□ -0.54
SMARCAL1-201ENST00000357276 PPIGQ13427 754 aaKnown RBP eCLIP11.69□□□□□ -0.546e-7■■■■■ 27
SMARCAL1-201ENST00000357276 IDO2Q6ZQW0 420 aa11.69□□□□□ -0.54
SMARCAL1-201ENST00000357276 NELL1Q92832 810 aa11.69□□□□□ -0.54
SMARCAL1-201ENST00000357276 C11orf54Q9H0W9 315 aaPredicted RBP11.69□□□□□ -0.54
SMARCAL1-201ENST00000357276 TMEM245Q9H330 911 aa11.69□□□□□ -0.54
SMARCAL1-201ENST00000357276 RLIMQ9NVW2 624 aa11.69□□□□□ -0.54
SMARCAL1-201ENST00000357276 TOR4AQ9NXH8 423 aa11.69□□□□□ -0.54
SMARCAL1-201ENST00000357276 PCDHB1Q9Y5F3 818 aa11.69□□□□□ -0.54
SMARCAL1-201ENST00000357276 PCM1Q15154 2024 aa11.69□□□□□ -0.54
SMARCAL1-201ENST00000357276 KCNE1BA0A087WTH5 132 aa11.69□□□□□ -0.54
SMARCAL1-201ENST00000357276 EFCAB10A6NFE3 127 aa11.69□□□□□ -0.54
SMARCAL1-201ENST00000357276 GCM2O75603 506 aaPredicted RBP11.69□□□□□ -0.54
SMARCAL1-201ENST00000357276 LGI1O95970 557 aa11.69□□□□□ -0.54
SMARCAL1-201ENST00000357276 PDYNP01213 254 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms