RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 EGFL7Q9UHF1 273 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 ITGB1P05556 798 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 IGFALSP35858 605 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 CCDC24Q8N4L8 307 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 DNAJC22Q8N4W6 341 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 PYCR2Q96C36 320 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 DEFB129Q9H1M3 183 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 SLC32A1Q9H598 525 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 ELAC1Q9H777 363 aaKnown RBP6.39□□□□□ -1.39
VPS13B-202ENST00000357162 SOCS5O75159 536 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 UPK1BO75841 260 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 GABBR2O75899 941 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 EBLN1P0CF75 366 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 EFNA1P20827 205 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-202ENST00000357162 RPS3P23396 243 aaKnown RBP eCLIP6.39□□□□□ -1.39
VPS13B-202ENST00000357162 ACVR2AP27037 513 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 RFC2P35250 354 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 RPIAP49247 311 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 ZNF81P51508 661 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 NFKB2Q00653 900 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 ANGPTL6Q8NI99 470 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 ADAMTS19Q8TE59 1207 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 CACNG6Q9BXT2 260 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 NKX1-2Q9UD57 310 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-202ENST00000357162 ZNF490Q9ULM2 529 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-202ENST00000357162 ADAM10O14672 748 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 PIP5K1BO14986 540 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 COQ9O75208 318 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 SLC35G6P0C7Q6 338 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 CCR4P51679 360 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 CACNB3P54284 484 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 CYP4F2P78329 520 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 ALG10Q5BKT4 473 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 LRRC28Q86X40 367 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-202ENST00000357162 RNF130Q86XS8 419 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 ABHD11Q8NFV4 315 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 KXD1Q9BQD3 176 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 YIPF4Q9BSR8 244 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 ABCD2Q9UBJ2 740 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 PCDHGA2Q9Y5H1 932 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 TOR1AO14656 332 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 MID1O15344 667 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 TGOLN2O43493 480 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 CPNE3O75131 537 aaKnown RBP6.39□□□□□ -1.39
VPS13B-202ENST00000357162 C22orf31O95567 290 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 ETFAP13804 333 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 PDX1P52945 283 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 CSTF1Q05048 431 aaKnown RBP6.39□□□□□ -1.39
VPS13B-202ENST00000357162 GTF2IRD2BQ6EKJ0 949 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 GTF2IRD2Q86UP8 949 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 TRAPPC5Q8IUR0 188 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 GATAD2BQ8WXI9 593 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 HSH2DQ96JZ2 352 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 OR4K3Q96R72 315 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 NELFAQ9H3P2 528 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 SPG21Q9NZD8 308 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 NAALAD2Q9Y3Q0 740 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 FUOMA2VDF0 154 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 E2F3O00716 465 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 IL1AP01583 271 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 HLA-DQA2P01906 255 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 ARL2P36404 184 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 CLCN3P51790 818 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 TARDBPQ13148 414 aaKnown RBP eCLIP6.39□□□□□ -1.393e-6■■■□□ 18.6
VPS13B-202ENST00000357162 RCAN2Q14206 197 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 SF3A2Q15428 464 aaKnown RBP6.39□□□□□ -1.39
VPS13B-202ENST00000357162 GPR153Q6NV75 609 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 OR7G1Q8NGA0 311 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 CHAC2Q8WUX2 184 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 GAB3Q8WWW8 586 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 TXNDC15Q96J42 360 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 AARSD1Q9BTE6 412 aaKnown RBP6.39□□□□□ -1.39
VPS13B-202ENST00000357162 PCDHB11Q9Y5F2 797 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 UBR2Q8IWV8 1755 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 A0A1W2PRB8 838 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 SLC22A31A6NKX4 558 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 SLC33A1O00400 549 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-202ENST00000357162 ANXA4P09525 319 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-202ENST00000357162 RAB5CP51148 216 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 ANKDD1AQ495B1 522 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 FRG2Q64ET8 278 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 OR10H5Q8NGA6 315 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 RNF31Q96EP0 1072 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 FRG2BQ96QU4 278 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 CHMP1AQ9HD42 196 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-202ENST00000357162 MED17Q9NVC6 651 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 SPIN1Q9Y657 262 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-202ENST00000357162 MYOFQ9NZM1 2061 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 TRIM64BA6NI03 449 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 GTPBP1O00178 669 aaKnown RBP6.39□□□□□ -1.39
VPS13B-202ENST00000357162 LSM3P62310 102 aaKnown RBP6.39□□□□□ -1.39
VPS13B-202ENST00000357162 ST3GAL3Q11203 375 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 NPRL3Q12980 569 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 MFSD13AQ14CX5 517 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 CYBRD1Q53TN4 286 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 FBXL19Q6PCT2 694 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 SUN3Q8TAQ9 357 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 OTUB2Q96DC9 234 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 TMEM74Q96NL1 305 aa6.39□□□□□ -1.39
VPS13B-202ENST00000357162 MECRQ9BV79 373 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms