RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 TNPO3Q9Y5L0 923 aaKnown RBP14.85□□□□□ -0.03
LMNA-201ENST00000347559 COL4A5P29400 1685 aa14.85□□□□□ -0.03
LMNA-201ENST00000347559 LOC285095A0A1B0GVY8 99 aa14.85□□□□□ -0.03
LMNA-201ENST00000347559 A0A1W2PQL4 384 aaPredicted RBP14.85□□□□□ -0.03
LMNA-201ENST00000347559 FZD9O00144 591 aa14.85□□□□□ -0.03
LMNA-201ENST00000347559 TNFRSF11BO00300 401 aa14.85□□□□□ -0.03
LMNA-201ENST00000347559 NBNO60934 754 aa14.85□□□□□ -0.03
LMNA-201ENST00000347559 AP2A2O94973 939 aa14.85□□□□□ -0.03
LMNA-201ENST00000347559 CDRT1O95170 752 aa14.85□□□□□ -0.03
LMNA-201ENST00000347559 ENGP17813 658 aa14.85□□□□□ -0.03
LMNA-201ENST00000347559 ALAS2P22557 587 aa14.85□□□□□ -0.03
LMNA-201ENST00000347559 ETV3P41162 512 aa14.85□□□□□ -0.03
LMNA-201ENST00000347559 BRCC3P46736 316 aa14.85□□□□□ -0.03
LMNA-201ENST00000347559 RPS14P62263 151 aaKnown RBP14.85□□□□□ -0.03
LMNA-201ENST00000347559 CPSF6Q16630 551 aaKnown RBP eCLIP14.85□□□□□ -0.03
LMNA-201ENST00000347559 VMACQ2NL98 169 aa14.85□□□□□ -0.03
LMNA-201ENST00000347559 PAN2Q504Q3 1202 aaKnown RBP14.85□□□□□ -0.03
LMNA-201ENST00000347559 LPCAT1Q8NF37 534 aa14.85□□□□□ -0.03
LMNA-201ENST00000347559 TMEM203Q969S6 136 aa14.85□□□□□ -0.03
LMNA-201ENST00000347559 MTERF3Q96E29 417 aa14.85□□□□□ -0.03
LMNA-201ENST00000347559 MRPL9Q9BYD2 267 aaKnown RBP14.85□□□□□ -0.03
LMNA-201ENST00000347559 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.85□□□□□ -0.031e-8■□□□□ 9.2
LMNA-201ENST00000347559 ZNF224Q9NZL3 707 aa14.85□□□□□ -0.03
LMNA-201ENST00000347559 CFAP20Q9Y6A4 193 aaKnown RBP14.85□□□□□ -0.03
LMNA-201ENST00000347559 H3BUI4 141 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 PLA2G10O15496 165 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 CLEC2LP0C7M8 214 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 TACR1P25103 407 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 ITGA1P56199 1179 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 ACVR1Q04771 509 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 TNK1Q13470 666 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 SLC39A12Q504Y0 691 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 MANEALQ5VSG8 457 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 KIAA1841Q6NSI8 718 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 PLEKHM3Q6ZWE6 761 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 MYLPFQ96A32 169 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 RAD9AQ99638 391 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 PPIL3Q9H2H8 161 aaKnown RBP14.84□□□□□ -0.03
LMNA-201ENST00000347559 OSER1Q9NX31 292 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 ACTL7AQ9Y615 435 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 ATP6V1G2-DDX39BF2Z307 99 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 CLIC1O00299 241 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 PDE9AO76083 593 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 GLUD1P00367 558 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 TNNI3P19429 210 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 ZNF235Q14590 738 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 FLYWCH1Q4VC44 716 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 MSANTD2Q6P1R3 559 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 FAM171BQ6P995 826 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 PLPP6Q8IY26 295 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 OR10G2Q8NGC3 310 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 PEX13Q92968 403 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 GTPBP3Q969Y2 492 aaKnown RBP14.84□□□□□ -0.03
LMNA-201ENST00000347559 PHF21AQ96BD5 680 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 PANX1Q96RD7 426 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 NIPSNAP1Q9BPW8 284 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 ABHD16BQ9H3Z7 469 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 GALNT9Q9HCQ5 603 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 PRM3Q9NNZ6 103 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 KLHL21Q9UJP4 597 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 TTC3P53804 2025 aa14.84□□□□□ -0.03
LMNA-201ENST00000347559 OPN1SWP03999 348 aa14.83□□□□□ -0.03
LMNA-201ENST00000347559 FGF1P05230 155 aa14.83□□□□□ -0.03
LMNA-201ENST00000347559 NAGAP17050 411 aa14.83□□□□□ -0.03
LMNA-201ENST00000347559 PRKACAP17612 351 aa14.83□□□□□ -0.03
LMNA-201ENST00000347559 CSTF2P33240 577 aaKnown RBP eCLIP14.83□□□□□ -0.03
LMNA-201ENST00000347559 MAN2A2P49641 1150 aa14.83□□□□□ -0.03
LMNA-201ENST00000347559 ZXDBP98169 803 aa14.83□□□□□ -0.03
LMNA-201ENST00000347559 HNRNPA0Q13151 305 aaKnown RBP14.83□□□□□ -0.03
LMNA-201ENST00000347559 SNTA1Q13424 505 aa14.83□□□□□ -0.03
LMNA-201ENST00000347559 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.83□□□□□ -0.03
LMNA-201ENST00000347559 LRRC66Q68CR7 880 aa14.83□□□□□ -0.03
LMNA-201ENST00000347559 LIMS2Q7Z4I7 341 aa14.83□□□□□ -0.03
LMNA-201ENST00000347559 GLT6D1Q7Z4J2 308 aa14.83□□□□□ -0.03
LMNA-201ENST00000347559 SLC34A3Q8N130 599 aa14.83□□□□□ -0.03
LMNA-201ENST00000347559 TBC1D20Q96BZ9 403 aa14.83□□□□□ -0.03
LMNA-201ENST00000347559 GABARAPL3Q9BY60 117 aa14.83□□□□□ -0.03
LMNA-201ENST00000347559 NIPAL2Q9H841 368 aa14.83□□□□□ -0.03
LMNA-201ENST00000347559 TEX51A0A1B0GUA7 166 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 FAM240BA0A1B0GVZ2 78 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 ARHGAP1Q07960 439 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 PTPRRQ15256 657 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 POU4F3Q15319 338 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 WSCD2Q2TBF2 565 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 CYP27C1Q4G0S4 372 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 GALNT11Q8NCW6 608 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 C19orf18Q8NEA5 215 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 ATP6V1C2Q8NEY4 427 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 GJD4Q96KN9 370 aaPredicted RBP14.83□□□□□ -0.04
LMNA-201ENST00000347559 EXOC2Q96KP1 924 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 IL4I1Q96RQ9 567 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 AIFM2Q9BRQ8 373 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 CRISPLD1Q9H336 500 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 B3GNT2Q9NY97 397 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 MOXD2PA6NHM9 499 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 WASHC1A8K0Z3 465 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 SLC28A1O00337 649 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 HOXB6P17509 224 aaKnown RBP14.83□□□□□ -0.04
LMNA-201ENST00000347559 PSMA1P25786 263 aaKnown RBP14.83□□□□□ -0.04
LMNA-201ENST00000347559 HLA-DMAP28067 261 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms