RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 NEDD8Q15843 81 aa11.98□□□□□ -0.49
RNF4-201ENST00000314289 ZNF658BQ4V348 819 aaPredicted RBP11.98□□□□□ -0.49
RNF4-201ENST00000314289 FGD3Q5JSP0 725 aa11.98□□□□□ -0.49
RNF4-201ENST00000314289 PPP4R4Q6NUP7 873 aa11.98□□□□□ -0.49
RNF4-201ENST00000314289 C16orf87Q6PH81 154 aa11.98□□□□□ -0.49
RNF4-201ENST00000314289 HDDC3Q8N4P3 179 aa11.98□□□□□ -0.49
RNF4-201ENST00000314289 OR56A3Q8NH54 315 aa11.98□□□□□ -0.49
RNF4-201ENST00000314289 HCAR2Q8TDS4 363 aa11.98□□□□□ -0.49
RNF4-201ENST00000314289 ATL1Q8WXF7 558 aa11.98□□□□□ -0.49
RNF4-201ENST00000314289 FAM120BQ96EK7 910 aaKnown RBP11.98□□□□□ -0.49
RNF4-201ENST00000314289 SORBS1Q9BX66 1292 aaKnown RBP11.98□□□□□ -0.49
RNF4-201ENST00000314289 OSGEPL1Q9H4B0 414 aa11.98□□□□□ -0.49
RNF4-201ENST00000314289 ARMC7Q9H6L4 198 aa11.98□□□□□ -0.49
RNF4-201ENST00000314289 KAT8Q9H7Z6 458 aaKnown RBP11.98□□□□□ -0.49
RNF4-201ENST00000314289 SELENONQ9NZV5 590 aa11.98□□□□□ -0.49
RNF4-201ENST00000314289 THAP10Q9P2Z0 257 aaPredicted RBP11.98□□□□□ -0.49
RNF4-201ENST00000314289 MAGEL2Q9UJ55 1249 aa11.98□□□□□ -0.49
RNF4-201ENST00000314289 ELOVL7A1L3X0 281 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 LDLRP01130 860 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 NTRK1P04629 796 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 ANXA4P09525 319 aaPredicted RBP11.97□□□□□ -0.49
RNF4-201ENST00000314289 CYP4F2P78329 520 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 TAP2Q03519 686 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 HYAL1Q12794 435 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 BNIP3Q12983 259 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 PMS2P3Q13401 168 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 DHRS4L2Q6PKH6 230 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 SLCO4C1Q6ZQN7 724 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 PROSER1Q86XN7 944 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 RIMKLAQ8IXN7 391 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 ADI1Q9BV57 179 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 ZCCHC2Q9C0B9 1178 aaKnown RBP11.97□□□□□ -0.49
RNF4-201ENST00000314289 POLR1BQ9H9Y6 1135 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 TBCCD1Q9NVR7 557 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 J3QRK9 145 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 CXCR6O00574 342 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 ZBTB11O95625 1053 aaPredicted RBP11.97□□□□□ -0.49
RNF4-201ENST00000314289 SNAP29O95721 258 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 PRPS2P11908 318 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 PSMB5P28074 263 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 PTPN6P29350 595 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 RAE1P78406 368 aaKnown RBP11.97□□□□□ -0.49
RNF4-201ENST00000314289 MC1RQ01726 317 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 FCHO2Q0JRZ9 810 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 GRHL2Q6ISB3 625 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 CAPN13Q6MZZ7 669 aaPredicted RBP11.97□□□□□ -0.49
RNF4-201ENST00000314289 ZDHHC5Q9C0B5 715 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 MKRN2Q9H000 416 aaKnown RBP11.97□□□□□ -0.49
RNF4-201ENST00000314289 SH3BP4Q9P0V3 963 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 H3BMQ9 156 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 FPGTO14772 594 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 SERPINA1P01009 418 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 STATHP02808 62 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 OCM2P0CE71 109 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 OCMP0CE72 109 aaPredicted RBP11.97□□□□□ -0.49
RNF4-201ENST00000314289 C21orf59P57076 290 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 LAPTM4AQ15012 233 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 PLCL1Q15111 1095 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 CST6Q15828 149 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 AGBL4Q5VU57 503 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 PNCKQ6P2M8 343 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 DSG4Q86SJ6 1040 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 FAM124AQ86V42 546 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 FAM20CQ8IXL6 584 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 OR4K1Q8NGD4 311 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 OR9A1PQ8NGU1 263 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 ITCHQ96J02 903 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 COG8Q96MW5 612 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 SPATA6Q9NWH7 488 aaPredicted RBP11.97□□□□□ -0.49
RNF4-201ENST00000314289 ASIC5Q9NY37 505 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 PLEKHM1Q9Y4G2 1056 aa11.97□□□□□ -0.49
RNF4-201ENST00000314289 TRBV5-3A0A0A0MS03 114 aa11.96□□□□□ -0.49
RNF4-201ENST00000314289 FUCA1P04066 466 aa11.96□□□□□ -0.49
RNF4-201ENST00000314289 MTHFRP42898 656 aa11.96□□□□□ -0.49
RNF4-201ENST00000314289 CDK3Q00526 305 aa11.96□□□□□ -0.49
RNF4-201ENST00000314289 CHRNB3Q05901 458 aa11.96□□□□□ -0.49
RNF4-201ENST00000314289 FGL2Q14314 439 aa11.96□□□□□ -0.49
RNF4-201ENST00000314289 TMEM31Q5JXX7 168 aa11.96□□□□□ -0.49
RNF4-201ENST00000314289 ZCCHC8Q6NZY4 707 aaKnown RBP11.96□□□□□ -0.49
RNF4-201ENST00000314289 ANGPTL8Q6UXH0 198 aa11.96□□□□□ -0.49
RNF4-201ENST00000314289 AMZ2Q86W34 360 aa11.96□□□□□ -0.49
RNF4-201ENST00000314289 MMP21Q8N119 569 aa11.96□□□□□ -0.49
RNF4-201ENST00000314289 TMEM132CQ8N3T6 1108 aa11.96□□□□□ -0.49
RNF4-201ENST00000314289 COX4I2Q96KJ9 171 aa11.96□□□□□ -0.49
RNF4-201ENST00000314289 NPLQ9BXD5 320 aaPredicted RBP11.96□□□□□ -0.49
RNF4-201ENST00000314289 KCNH6Q9H252 994 aa11.96□□□□□ -0.49
RNF4-201ENST00000314289 NTN4Q9HB63 628 aa11.96□□□□□ -0.49
RNF4-201ENST00000314289 INIPQ9NRY2 104 aa11.96□□□□□ -0.49
RNF4-201ENST00000314289 DGKBQ9Y6T7 804 aa11.96□□□□□ -0.49
RNF4-201ENST00000314289 COL4A3Q01955 1670 aa11.96□□□□□ -0.5
RNF4-201ENST00000314289 PRAMEF33A0A0G2JMD5 474 aa11.96□□□□□ -0.5
RNF4-201ENST00000314289 GABRR3A8MPY1 467 aa11.96□□□□□ -0.5
RNF4-201ENST00000314289 CDH1P12830 882 aa11.96□□□□□ -0.5
RNF4-201ENST00000314289 ACP5P13686 325 aa11.96□□□□□ -0.5
RNF4-201ENST00000314289 PRKACGP22612 351 aa11.96□□□□□ -0.5
RNF4-201ENST00000314289 MAPK1P28482 360 aa11.96□□□□□ -0.5
RNF4-201ENST00000314289 AQP1P29972 269 aa11.96□□□□□ -0.5
RNF4-201ENST00000314289 VASPP50552 380 aaPredicted RBP11.96□□□□□ -0.5
RNF4-201ENST00000314289 MERTKQ12866 999 aa11.96□□□□□ -0.5
RNF4-201ENST00000314289 RAB39AQ14964 217 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms