RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 PLA2G5P39877 138 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 NOVA1P51513 510 aaKnown RBP9.07□□□□□ -0.96
RFX3-201ENST00000302303 HSD11B2P80365 405 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 ABRAXAS2Q15018 415 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 ISXQ2M1V0 245 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 DEFB110Q30KQ9 67 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 CCDC157Q569K6 752 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 SH2D4BQ5SQS7 431 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 ATG16L1Q676U5 607 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 RNF165Q6ZSG1 346 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 Q6ZSR9 355 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 KMT5CQ86Y97 462 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 MARCH9Q86YJ5 346 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 MCATQ8IVS2 390 aaKnown RBP9.07□□□□□ -0.96
RFX3-201ENST00000302303 TRIM42Q8IWZ5 723 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.07□□□□□ -0.96
RFX3-201ENST00000302303 CLYBLQ8N0X4 340 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 SHISA5Q8N114 240 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 MFSD9Q8NBP5 474 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 AGR3Q8TD06 166 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 LRRC8CQ8TDW0 803 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 ZNF473Q8WTR7 871 aaKnown RBP9.07□□□□□ -0.96
RFX3-201ENST00000302303 ATP6V1E2Q96A05 226 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 ZNF501Q96CX3 271 aaPredicted RBP9.07□□□□□ -0.96
RFX3-201ENST00000302303 C3orf30Q96M34 536 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 ZFYVE21Q9BQ24 234 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 MACROD1Q9BQ69 325 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 OCIAD1Q9NX40 245 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 ADAM21Q9UKJ8 722 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 AP1M2Q9Y6Q5 423 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 MAGEB17A8MXT2 336 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 H0YGG7 62 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 MANBAO00462 879 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 AZIN1O14977 448 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 OR1F1O43749 312 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 RASSF9O75901 435 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 KLHL18O94889 574 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 HSPA4LO95757 839 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 MT-CO3P00414 261 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 PDYNP01213 254 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 STATHP02808 62 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 ENO1P06733 434 aaKnown RBP9.06□□□□□ -0.96
RFX3-201ENST00000302303 SMIM10L1P0DMW3 83 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 UROSP10746 265 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 NEFHP12036 1026 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 CCL4P13236 92 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 LSP1P33241 339 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 AHRP35869 848 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 RPL14P50914 215 aaKnown RBP9.06□□□□□ -0.96
RFX3-201ENST00000302303 SEC24CP53992 1094 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 ARF3P61204 181 aaPredicted RBP9.06□□□□□ -0.96
RFX3-201ENST00000302303 LAPTM5Q13571 262 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 TRA2AQ13595 282 aaKnown RBP eCLIP9.06□□□□□ -0.96
RFX3-201ENST00000302303 COL9A2Q14055 689 aaPredicted RBP9.06□□□□□ -0.96
RFX3-201ENST00000302303 GPR19Q15760 415 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 PRTGQ2VWP7 1150 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 ADPRMQ3LIE5 342 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 HES3Q5TGS1 186 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 PRAMEF17Q5VTA0 474 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 FRG2Q64ET8 278 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 MED27Q6P2C8 311 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 SCIMPQ6UWF3 145 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 RBM44Q6ZP01 1051 aaKnown RBP9.06□□□□□ -0.96
RFX3-201ENST00000302303 FAM47EQ6ZV65 393 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 TRIM46Q7Z4K8 759 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 UBE3DQ7Z6J8 389 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 WDR75Q8IWA0 830 aaKnown RBP9.06□□□□□ -0.96
RFX3-201ENST00000302303 LRRC34Q8IZ02 419 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 CACTIN-AS1Q8N1I8 211 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 EFCAB3Q8N7B9 438 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 OR2T11Q8NH01 316 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 HUS1BQ8NHY5 278 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 PPP1R14CQ8TAE6 165 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 METTL6Q8TCB7 284 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 DYDC1Q8WWB3 177 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 ADAMTS14Q8WXS8 1223 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 MTFMTQ96DP5 389 aaKnown RBP9.06□□□□□ -0.96
RFX3-201ENST00000302303 C11orf24Q96F05 449 aaPredicted RBP9.06□□□□□ -0.96
RFX3-201ENST00000302303 SMIM10Q96HG1 83 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 FRG2BQ96QU4 278 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 HBEGFQ99075 208 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 AIF1LQ9BQI0 150 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 RTKNQ9BST9 563 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 SLC29A3Q9BZD2 475 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 PITHD1Q9GZP4 211 aaPredicted RBP9.06□□□□□ -0.96
RFX3-201ENST00000302303 ILKAPQ9H0C8 392 aaPredicted RBP9.06□□□□□ -0.96
RFX3-201ENST00000302303 KLHL31Q9H511 634 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 SYNDIG1Q9H7V2 258 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 KCNK13Q9HB14 408 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 LHX9Q9NQ69 397 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 ZFP69BQ9UJL9 534 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 CDV3Q9UKY7 258 aaKnown RBP9.06□□□□□ -0.96
RFX3-201ENST00000302303 MRPS2Q9Y399 296 aaKnown RBP9.06□□□□□ -0.96
RFX3-201ENST00000302303 PCDHGA11Q9Y5H2 935 aa9.06□□□□□ -0.96
RFX3-201ENST00000302303 MDC1Q14676 2089 aaKnown RBP9.06□□□□□ -0.96
RFX3-201ENST00000302303 AGRPO00253 132 aa9.05□□□□□ -0.96
RFX3-201ENST00000302303 FOXE1O00358 373 aaPredicted RBP9.05□□□□□ -0.96
RFX3-201ENST00000302303 SHOX2O60902 331 aaPredicted RBP9.05□□□□□ -0.96
RFX3-201ENST00000302303 CSO75390 466 aaKnown RBP9.05□□□□□ -0.96
RFX3-201ENST00000302303 SNUPNO95149 360 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms