RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 RNF6Q9Y252 685 aa23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 PCDHGA6Q9Y5G7 932 aa23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 SCN8AQ9UQD0 1980 aa23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 A0A1W2PRU2 124 aa23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 EFCAB9A8MZ26 197 aa23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 C8GP07360 202 aa23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 IL1RNP18510 177 aa23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 CYP2A7P20853 494 aa23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 ETV3P41162 512 aa23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 SPINT3P49223 89 aa23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 SEPHS1P49903 392 aa23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 CRISP3P54108 245 aa23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 EPHB3P54753 998 aa23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 SNRPD1P62314 119 aaKnown RBP23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 COX20Q5RI15 118 aa23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 SLC22A16Q86VW1 577 aa23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 THOC6Q86W42 341 aaKnown RBP23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 PSD4Q8NDX1 1056 aa23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 DNAJB8Q8NHS0 232 aa23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 ZHX1-C8orf76Q96EF9 292 aa23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 TRMT2BQ96GJ1 504 aaKnown RBP23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 FEVQ99581 238 aa23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 ACSL6Q9UKU0 697 aa23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 ARHGEF33A8MVX0 844 aa23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 SEMG1P04279 462 aa23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 TGFBR2P37173 567 aa23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 CRATP43155 626 aa23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 GGTA1PQ4G0N0 100 aa23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 CSGALNACT1Q8TDX6 532 aa23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 SORCS1Q8WY21 1168 aa23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 SGK2Q9HBY8 427 aa23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 RAD18Q9NS91 495 aa23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 TTC34A8MYJ7 566 aa23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 INHAP05111 366 aa23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 SLC19A1P41440 591 aa23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 CLK1P49759 484 aaKnown RBP23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 KCNJ10P78508 379 aa23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 HIST2H2ACQ16777 129 aaPredicted RBP23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 C22orf39Q6P5X5 142 aa23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 HSD11B1LQ7Z5J1 315 aa23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 TSEN54Q7Z6J9 526 aaKnown RBP23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 FAM124AQ86V42 546 aa23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 TSPYL5Q86VY4 417 aaPredicted RBP23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 HTRA1Q92743 480 aa23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 OR4K3Q96R72 315 aa23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 COPS4Q9BT78 406 aa23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 SLIRPQ9GZT3 109 aaKnown RBP23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 TAS2R16Q9NYV7 291 aa23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 LSM7Q9UK45 103 aaKnown RBP23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 CCL26Q9Y258 94 aa23.54■■□□□ 1.36
SPTSSA-201ENST00000298130 LOC100506127A0A0U1RQW1 187 aa23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 GNG14A0A1W2PPG7 69 aa23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 NUAK1O60285 661 aa23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 ANXA4P09525 319 aaPredicted RBP23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 DBTP11182 482 aaKnown RBP23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 TRPC1P48995 793 aa23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 IQCCQ4KMZ1 466 aa23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 COLEC12Q5KU26 742 aa23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 UTS2BQ765I0 119 aa23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 P3H2Q8IVL5 708 aa23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 VMP1Q96GC9 406 aa23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 C7orf34Q96L11 122 aa23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 C6orf62Q9GZU0 229 aaPredicted RBP23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 NECTIN3Q9NQS3 549 aa23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 MRPL17Q9NRX2 175 aaKnown RBP23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 SRRDQ9UH36 339 aa23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 TMED5Q9Y3A6 229 aa23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 TRIM43BA6NCK2 446 aa23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 J3KTA2 159 aa23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 GCM2O75603 506 aaPredicted RBP23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 ETFAP13804 333 aa23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 CCDC103Q8IW40 242 aa23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 NLGN4XQ8N0W4 816 aa23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 OR5AK3PQ8NH89 298 aa23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 TMEM169Q96HH4 297 aa23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 HHIPQ96QV1 700 aa23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 PCDHB11Q9Y5F2 797 aa23.53■■□□□ 1.36
SPTSSA-201ENST00000298130 OR2A25A4D2G3 310 aa23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 TMEM229AB2RXF0 380 aa23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 GFYI3L273 518 aa23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 HOXA2O43364 376 aa23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 SUV39H1O43463 412 aa23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 GRK5P34947 590 aa23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 MC1RQ01726 317 aa23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 CPTPQ5TA50 214 aa23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 SLC5A8Q8N695 610 aa23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 UTP15Q8TED0 518 aaKnown RBP23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 DCSTAMPQ9H295 470 aa23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 ITM2CQ9NQX7 267 aa23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 GPR83Q9NYM4 423 aa23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 RBMX2Q9Y388 322 aaKnown RBP23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 A8MU76 341 aa23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 C9P02748 559 aa23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 SOD2P04179 222 aa23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 CTSCP53634 463 aa23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 RAB15P59190 212 aa23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 RAE1P78406 368 aaKnown RBP23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 SRSF11Q05519 484 aaKnown RBP23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 OTOP2Q7RTS6 562 aa23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 ZNF366Q8N895 744 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms