RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 FGFR1P11362 822 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 TLE2Q04725 743 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 PPATQ06203 517 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 IRAK1BP1Q5VVH5 260 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 SHKBP1Q8TBC3 707 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 ETNK2Q9NVF9 386 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 DOPEY1Q5JWR5 2465 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 CILPO75339 1184 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 RPP14O95059 124 aaKnown RBP4.72□□□□□ -1.65
CSMD3-201ENST00000297405 CSF2RAP15509 400 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 CPN2P22792 545 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 TEKQ02763 1124 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 ZNF33AQ06730 810 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 ELAVL2Q12926 359 aaKnown RBP4.72□□□□□ -1.65
CSMD3-201ENST00000297405 QRICH1Q2TAL8 776 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 GCNT6Q5T4J0 391 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 ANKRD54Q6NXT1 300 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 TMUB2Q71RG4 321 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 DPP9Q86TI2 863 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 LGALS12Q96DT0 336 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 INPP4AQ96PE3 977 aaPredicted RBP4.72□□□□□ -1.65
CSMD3-201ENST00000297405 ERVK-5Q9HDB9 667 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 SH3BGRL2Q9UJC5 107 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 CNOT6Q9ULM6 557 aaKnown RBP4.72□□□□□ -1.65
CSMD3-201ENST00000297405 TFR2Q9UP52 801 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 FAM166BA8MTA8 275 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 PRR5-ARHGAP8B1AHC4 643 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 H7C4K7 107 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 MTA2O94776 668 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 CCNFP41002 786 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 GABRA2P47869 451 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 ARHGAP8P85298 464 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 RETSATQ6NUM9 610 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 H3F3CQ6NXT2 135 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 FOXR1Q6PIV2 292 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 GSG1LQ6UXU4 331 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 ZPBP2Q6X784 338 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 CEP68Q76N32 757 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 JAZF1Q86VZ6 243 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 TMEM80Q96HE8 168 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 POMKQ9H5K3 350 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 TMEM27Q9HBJ8 222 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 EMC7Q9NPA0 242 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 ENY2Q9NPA8 101 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 IMP3Q9NV31 184 aaKnown RBP4.72□□□□□ -1.65
CSMD3-201ENST00000297405 TEX10Q9NXF1 929 aaPredicted RBP4.72□□□□□ -1.65
CSMD3-201ENST00000297405 FAM205AQ6ZU69 1335 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 K7EPI3 171 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 PKMP14618 531 aaKnown RBP4.72□□□□□ -1.65
CSMD3-201ENST00000297405 SPI1P17947 270 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 MZF1P28698 734 aaPredicted RBP4.72□□□□□ -1.65
CSMD3-201ENST00000297405 BUD31P41223 144 aaPredicted RBP4.72□□□□□ -1.65
CSMD3-201ENST00000297405 UBAP2LQ14157 1087 aaKnown RBP4.72□□□□□ -1.65
CSMD3-201ENST00000297405 TLR1Q15399 786 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 CES5AQ6NT32 575 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 RALGPS2Q86X27 583 aaPredicted RBP4.72□□□□□ -1.65
CSMD3-201ENST00000297405 PPP1R3BQ86XI6 285 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 ZNF317Q96PQ6 595 aaPredicted RBP4.72□□□□□ -1.65
CSMD3-201ENST00000297405 RBBP6Q7Z6E9 1792 aaKnown RBP4.72□□□□□ -1.65
CSMD3-201ENST00000297405 A0A1W2PS29 197 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 ACOT7O00154 380 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 CYTIPO60759 359 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 LGR5O75473 907 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 BPNT1O95861 308 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 ARPP19P56211 112 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 TCTAP57738 103 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 SNTB2Q13425 540 aaKnown RBP4.72□□□□□ -1.65
CSMD3-201ENST00000297405 ELOAQ14241 798 aaKnown RBP4.72□□□□□ -1.65
CSMD3-201ENST00000297405 FCN2Q15485 313 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 CCNJQ5T5M9 372 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 IL31Q6EBC2 164 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 OR13C2Q8NGS9 318 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.72□□□□□ -1.65
CSMD3-201ENST00000297405 TECTBQ96PL2 329 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 SLC2A9Q9NRM0 540 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 FLRT1Q9NZU1 646 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 GHRLQ9UBU3 117 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 PCDHGA6Q9Y5G7 932 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 NLRP1Q9C000 1473 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 CEMIPQ8WUJ3 1361 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 MEIS3P1A6NDR6 274 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 BOLA2-SMG1P6H3BVE0 249 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 RBBP9O75884 186 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 STAU1O95793 577 aaKnown RBP4.72□□□□□ -1.65
CSMD3-201ENST00000297405 TFP02787 698 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 HTR2CP28335 458 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 SSTR1P30872 391 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 PTPAQ15257 358 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 USP41Q3LFD5 358 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 MPPE1Q53F39 396 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 FAM171BQ6P995 826 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 OR8J3Q8NGG0 315 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 NEIL3Q8TAT5 605 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 ACOX2Q99424 681 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 GJE1A6NN92 205 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 A8MVJ9 347 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 CD53P19397 219 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 CD9P21926 228 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 SLC26A5P58743 744 aa4.72□□□□□ -1.65
CSMD3-201ENST00000297405 NFATC3Q12968 1075 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms