RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 AVL9Q8NBF6 648 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 GLB1L3Q8NCI6 653 aaPredicted RBP21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 OR2A14Q96R47 310 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 SARGQ9BW04 601 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 DPY30Q9C005 99 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 OR51B5Q9H339 312 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 DOLKQ9UPQ8 538 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 HEATR5BQ9P2D3 2071 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 A0A088AWK7 358 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 OR6C74A6NCV1 312 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 LCMT2O60294 686 aaKnown RBP21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 EEDO75530 441 aaKnown RBP21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 PTX3P26022 381 aaPredicted RBP21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 CTSKP43235 329 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 FASLGP48023 281 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 GALNT18Q6P9A2 607 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 C17orf82Q86X59 251 aaPredicted RBP21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 FAM13CQ8NE31 585 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 CLHC1Q8NHS4 586 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 NELL1Q92832 810 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 MS4A8Q9BY19 250 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 CLMPQ9H6B4 373 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 WDR41Q9HAD4 459 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 PRM3Q9NNZ6 103 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 ACTR10Q9NZ32 417 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 MAP10Q9P2G4 905 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 SNX7Q9UNH6 387 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 ENTPD2Q9Y5L3 495 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 CCDC154A6NI56 674 aa21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 HRO43593 1189 aa21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 OR1F1O43749 312 aa21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 NOBOXO60393 691 aa21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 RASSF9O75901 435 aa21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 MYO1DO94832 1006 aa21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 GNSP15586 552 aa21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 UGT2B7P16662 529 aa21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 POLR2CP19387 275 aaPredicted RBP21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 RAP1GDS1P52306 607 aa21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 MAZP56270 477 aaKnown RBP21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 TLR1Q15399 786 aa21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 C8orf82Q6P1X6 216 aaPredicted RBP21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 PLD3Q8IV08 490 aa21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 ULK2Q8IYT8 1036 aa21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 KRTCAP2Q8N6L1 136 aa21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 PCYOX1LQ8NBM8 494 aa21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 VPS33AQ96AX1 596 aa21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 ROPN1LQ96C74 230 aa21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 CLPTM1LQ96KA5 538 aa21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 TMEM74Q96NL1 305 aa21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 TSSK3Q96PN8 268 aa21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 ZBTB18Q99592 522 aa21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 EBPLQ9BY08 206 aa21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 TMEM74BQ9NUR3 256 aa21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 PILRBQ9UKJ0 227 aa21.94■■□□□ 1.1
SMARCB1-201ENST00000263121 HAT1O14929 419 aa21.93■■□□□ 1.1
SMARCB1-201ENST00000263121 SDC3O75056 442 aa21.93■■□□□ 1.1
SMARCB1-201ENST00000263121 TIA1P31483 386 aaKnown RBP eCLIP21.93■■□□□ 1.1
SMARCB1-201ENST00000263121 GRK3P35626 688 aa21.93■■□□□ 1.1
SMARCB1-201ENST00000263121 GRIA3P42263 894 aa21.93■■□□□ 1.1
SMARCB1-201ENST00000263121 BNC1Q01954 994 aa21.93■■□□□ 1.1
SMARCB1-201ENST00000263121 TIGD2Q4W5G0 525 aa21.93■■□□□ 1.1
SMARCB1-201ENST00000263121 PGM2L1Q6PCE3 622 aa21.93■■□□□ 1.1
SMARCB1-201ENST00000263121 OGFOD3Q6PK18 319 aa21.93■■□□□ 1.1
SMARCB1-201ENST00000263121 PAQR7Q86WK9 346 aa21.93■■□□□ 1.1
SMARCB1-201ENST00000263121 SCUBE1Q8IWY4 988 aa21.93■■□□□ 1.1
SMARCB1-201ENST00000263121 METTL4Q8N3J2 472 aa21.93■■□□□ 1.1
SMARCB1-201ENST00000263121 ARL14Q8N4G2 192 aa21.93■■□□□ 1.1
SMARCB1-201ENST00000263121 GPR156Q8NFN8 814 aa21.93■■□□□ 1.1
SMARCB1-201ENST00000263121 TTLQ8NG68 377 aa21.93■■□□□ 1.1
SMARCB1-201ENST00000263121 OR10G6Q8NH81 332 aa21.93■■□□□ 1.1
SMARCB1-201ENST00000263121 NUDT8Q8WV74 236 aa21.93■■□□□ 1.1
SMARCB1-201ENST00000263121 UCKL1Q9NWZ5 548 aa21.93■■□□□ 1.1
SMARCB1-201ENST00000263121 PRPF19Q9UMS4 504 aaKnown RBP21.93■■□□□ 1.1
SMARCB1-201ENST00000263121 SNX11Q9Y5W9 270 aa21.93■■□□□ 1.1
SMARCB1-201ENST00000263121 GPR37L1O60883 481 aa21.92■■□□□ 1.1
SMARCB1-201ENST00000263121 CLEC3AO75596 197 aa21.92■■□□□ 1.1
SMARCB1-201ENST00000263121 SNRNP200O75643 2136 aaKnown RBP21.92■■□□□ 1.1
SMARCB1-201ENST00000263121 SEMA3DO95025 777 aa21.92■■□□□ 1.1
SMARCB1-201ENST00000263121 ANXA6P08133 673 aa21.92■■□□□ 1.1
SMARCB1-201ENST00000263121 GSTM2P28161 218 aa21.92■■□□□ 1.1
SMARCB1-201ENST00000263121 BCL6P41182 706 aa21.92■■□□□ 1.1
SMARCB1-201ENST00000263121 CYP4F2P78329 520 aa21.92■■□□□ 1.1
SMARCB1-201ENST00000263121 COMMD6Q7Z4G1 85 aa21.92■■□□□ 1.1
SMARCB1-201ENST00000263121 RIMKLAQ8IXN7 391 aa21.92■■□□□ 1.1
SMARCB1-201ENST00000263121 CREB3L4Q8TEY5 395 aa21.92■■□□□ 1.1
SMARCB1-201ENST00000263121 EGLN2Q96KS0 407 aa21.92■■□□□ 1.1
SMARCB1-201ENST00000263121 UCK1Q9HA47 277 aa21.92■■□□□ 1.1
SMARCB1-201ENST00000263121 SUSD2Q9UGT4 822 aa21.92■■□□□ 1.1
SMARCB1-201ENST00000263121 LEF1Q9UJU2 399 aaPredicted RBP21.92■■□□□ 1.1
SMARCB1-201ENST00000263121 KLHL20Q9Y2M5 609 aa21.92■■□□□ 1.1
SMARCB1-201ENST00000263121 PCDHGA7Q9Y5G6 932 aa21.92■■□□□ 1.1
SMARCB1-201ENST00000263121 GSAPA4D1B5 854 aa21.91■■□□□ 1.1
SMARCB1-201ENST00000263121 C2orf74A8MZ97 194 aa21.91■■□□□ 1.1
SMARCB1-201ENST00000263121 TNFSF14O43557 240 aa21.91■■□□□ 1.1
SMARCB1-201ENST00000263121 DPP6P42658 865 aa21.91■■□□□ 1.1
SMARCB1-201ENST00000263121 CLNS1AP54105 237 aaKnown RBP21.91■■□□□ 1.1
SMARCB1-201ENST00000263121 C21orf58P58505 322 aa21.91■■□□□ 1.1
SMARCB1-201ENST00000263121 DEFB133Q30KQ1 61 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms