RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 DNAJC15Q9Y5T4 150 aa23.33■■□□□ 1.33
SCN1B-201ENST00000262631 LOC105369274A0A096LPK9 316 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 LOC102723532A0A0G2JNH3 316 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 CRCPO75575 148 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 SNUPNO95149 360 aaKnown RBP23.32■■□□□ 1.32
SCN1B-201ENST00000262631 KCNK5O95279 499 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 STATHP02808 62 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 KITP10721 976 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 FOLR1P15328 257 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 CXCR2P25025 360 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 PLA2G5P39877 138 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 SCTRP47872 440 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 GABRA4P48169 554 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 RPL14P50914 215 aaKnown RBP23.32■■□□□ 1.32
SCN1B-201ENST00000262631 INHBCP55103 352 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 C16orf72Q14CZ0 275 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 FRG2Q64ET8 278 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 VN1R5Q7Z5H4 357 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 OR4N4Q8N0Y3 316 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 ZNF317Q96PQ6 595 aaPredicted RBP23.32■■□□□ 1.32
SCN1B-201ENST00000262631 FRG2BQ96QU4 278 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 SLC29A3Q9BZD2 475 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 CHRNA10Q9GZZ6 450 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 PCDHGA4Q9Y5G9 962 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 PCDHGA11Q9Y5H2 935 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 UROSP10746 265 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 PCNAP12004 261 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 ARL4DP49703 201 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 CYP4F2P78329 520 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 RELAQ04206 551 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 HIST2H2ACQ16777 129 aaPredicted RBP23.32■■□□□ 1.32
SCN1B-201ENST00000262631 SGO1Q5FBB7 561 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 HES3Q5TGS1 186 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 HIST2H2AA3Q6FI13 130 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 VN1R4Q7Z5H5 301 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 KMT5CQ86Y97 462 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 CLYBLQ8N0X4 340 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 HUS1BQ8NHY5 278 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 MTERF1Q99551 399 aaKnown RBP23.32■■□□□ 1.32
SCN1B-201ENST00000262631 MACROD1Q9BQ69 325 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 APOBEC2Q9Y235 224 aaKnown RBP23.32■■□□□ 1.32
SCN1B-201ENST00000262631 PTGDR2Q9Y5Y4 395 aa23.32■■□□□ 1.32
SCN1B-201ENST00000262631 MANBAO00462 879 aa23.31■■□□□ 1.32
SCN1B-201ENST00000262631 EDF1O60869 148 aaKnown RBP23.31■■□□□ 1.32
SCN1B-201ENST00000262631 JUNP05412 331 aaKnown RBP23.31■■□□□ 1.32
SCN1B-201ENST00000262631 HMOX2P30519 316 aa23.31■■□□□ 1.32
SCN1B-201ENST00000262631 LSP1P33241 339 aa23.31■■□□□ 1.32
SCN1B-201ENST00000262631 RPS15AP62244 130 aaKnown RBP23.31■■□□□ 1.32
SCN1B-201ENST00000262631 GNGT1P63211 74 aa23.31■■□□□ 1.32
SCN1B-201ENST00000262631 SCIMPQ6UWF3 145 aa23.31■■□□□ 1.32
SCN1B-201ENST00000262631 CRLF3Q8IUI8 442 aa23.31■■□□□ 1.32
SCN1B-201ENST00000262631 MFSD9Q8NBP5 474 aa23.31■■□□□ 1.32
SCN1B-201ENST00000262631 MAGEB10Q96LZ2 347 aaPredicted RBP23.31■■□□□ 1.32
SCN1B-201ENST00000262631 TMEM74Q96NL1 305 aa23.31■■□□□ 1.32
SCN1B-201ENST00000262631 PITHD1Q9GZP4 211 aaPredicted RBP23.31■■□□□ 1.32
SCN1B-201ENST00000262631 TUBB1Q9H4B7 451 aa23.31■■□□□ 1.32
SCN1B-201ENST00000262631 ELOVL6Q9H5J4 265 aa23.31■■□□□ 1.32
SCN1B-201ENST00000262631 NT5DC2Q9H857 520 aa23.31■■□□□ 1.32
SCN1B-201ENST00000262631 FGFR1OP2Q9NVK5 253 aa23.31■■□□□ 1.32
SCN1B-201ENST00000262631 CNOT1A5YKK6 2376 aaKnown RBP23.3■■□□□ 1.32
SCN1B-201ENST00000262631 DCDC2BA2VCK2 349 aa23.3■■□□□ 1.32
SCN1B-201ENST00000262631 TBX6O95947 436 aaPredicted RBP23.3■■□□□ 1.32
SCN1B-201ENST00000262631 MT-CO3P00414 261 aa23.3■■□□□ 1.32
SCN1B-201ENST00000262631 VIMP08670 466 aaKnown RBP23.3■■□□□ 1.32
SCN1B-201ENST00000262631 CDK4P11802 303 aa23.3■■□□□ 1.32
SCN1B-201ENST00000262631 CCKBRP32239 447 aa23.3■■□□□ 1.32
SCN1B-201ENST00000262631 TRA2AQ13595 282 aaKnown RBP eCLIP23.3■■□□□ 1.32
SCN1B-201ENST00000262631 DDX39BQ13838 428 aaKnown RBP23.3■■□□□ 1.32
SCN1B-201ENST00000262631 COL9A2Q14055 689 aaPredicted RBP23.3■■□□□ 1.32
SCN1B-201ENST00000262631 ABRAXAS2Q15018 415 aa23.3■■□□□ 1.32
SCN1B-201ENST00000262631 GPR19Q15760 415 aa23.3■■□□□ 1.32
SCN1B-201ENST00000262631 MCATQ8IVS2 390 aaKnown RBP23.3■■□□□ 1.32
SCN1B-201ENST00000262631 LRRC34Q8IZ02 419 aa23.3■■□□□ 1.32
SCN1B-201ENST00000262631 UBE2E3Q969T4 207 aa23.3■■□□□ 1.32
SCN1B-201ENST00000262631 RHBGQ9H310 441 aa23.3■■□□□ 1.32
SCN1B-201ENST00000262631 ZFP69BQ9UJL9 534 aa23.3■■□□□ 1.32
SCN1B-201ENST00000262631 ADAM21Q9UKJ8 722 aa23.3■■□□□ 1.32
SCN1B-201ENST00000262631 SNX6Q9UNH7 406 aa23.3■■□□□ 1.32
SCN1B-201ENST00000262631 H0YGG7 62 aa23.29■■□□□ 1.32
SCN1B-201ENST00000262631 PDYNP01213 254 aa23.29■■□□□ 1.32
SCN1B-201ENST00000262631 ARF3P61204 181 aaPredicted RBP23.29■■□□□ 1.32
SCN1B-201ENST00000262631 IFT88Q13099 833 aa23.29■■□□□ 1.32
SCN1B-201ENST00000262631 ISXQ2M1V0 245 aa23.29■■□□□ 1.32
SCN1B-201ENST00000262631 CREB3L4Q8TEY5 395 aa23.29■■□□□ 1.32
SCN1B-201ENST00000262631 TWIST2Q8WVJ9 160 aa23.29■■□□□ 1.32
SCN1B-201ENST00000262631 USP7Q93009 1102 aa23.29■■□□□ 1.32
SCN1B-201ENST00000262631 AP1M2Q9Y6Q5 423 aa23.29■■□□□ 1.32
SCN1B-201ENST00000262631 PIEZO1Q92508 2521 aa23.29■■□□□ 1.32
SCN1B-201ENST00000262631 HGSO14964 777 aaPredicted RBP23.28■■□□□ 1.32
SCN1B-201ENST00000262631 P2RX6O15547 441 aa23.28■■□□□ 1.32
SCN1B-201ENST00000262631 HYAL3O43820 417 aaPredicted RBP23.28■■□□□ 1.32
SCN1B-201ENST00000262631 ULK1O75385 1050 aa23.28■■□□□ 1.32
SCN1B-201ENST00000262631 CSO75390 466 aaKnown RBP23.28■■□□□ 1.32
SCN1B-201ENST00000262631 KRT6AP02538 564 aa23.28■■□□□ 1.32
SCN1B-201ENST00000262631 KRT6BP04259 564 aa23.28■■□□□ 1.32
SCN1B-201ENST00000262631 AHRP35869 848 aa23.28■■□□□ 1.32
SCN1B-201ENST00000262631 KRT6CP48668 564 aa23.28■■□□□ 1.32
SCN1B-201ENST00000262631 SEC24CP53992 1094 aa23.28■■□□□ 1.32
SCN1B-201ENST00000262631 ZC3H12BQ5HYM0 836 aaKnown RBP23.28■■□□□ 1.32
SCN1B-201ENST00000262631 DGLUCYQ7Z3D6 616 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms