RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 PERM1Q5SV97 790 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 CPTPQ5TA50 214 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 ADCK1Q86TW2 530 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 MFSD4AQ8N468 514 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 OR6Q1Q8NGQ2 317 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 PHF10Q8WUB8 498 aaKnown RBP14.71□□□□□ -0.05
DDX56-201ENST00000258772 CLP1Q92989 425 aaKnown RBP14.71□□□□□ -0.05
DDX56-201ENST00000258772 TAMM41Q96BW9 452 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 LGALS12Q96DT0 336 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 METTL2AQ96IZ6 378 aaKnown RBP14.71□□□□□ -0.05
DDX56-201ENST00000258772 ZNF558Q96NG5 402 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 EPYCQ99645 322 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 EMILIN2Q9BXX0 1053 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 BTNL2Q9UIR0 455 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 C1orf226A1L170 272 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 OR2AG2A6NM03 316 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 ARHGEF33A8MVX0 844 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 H0YIV9 168 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 SUV39H1O43463 412 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 ETHE1O95571 254 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 GSTM1P09488 218 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 POLR2LP62875 67 aaKnown RBP14.71□□□□□ -0.05
DDX56-201ENST00000258772 RAE1P78406 368 aaKnown RBP14.71□□□□□ -0.05
DDX56-201ENST00000258772 IFITM3Q01628 133 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 NAE1Q13564 534 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 INAQ16352 499 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 TMEM236Q5W0B7 351 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 AHSA2Q719I0 299 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 ENTHD1Q8IYW4 607 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 VPS37AQ8NEZ2 397 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 APH1BQ8WW43 257 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 STARD8Q92502 1023 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 HRASLS5Q96KN8 279 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 SPATA9Q9BWV2 254 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 FAM83DQ9H4H8 585 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 FAM8A1Q9UBU6 413 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 VPS4AQ9UN37 437 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 PCDHGB3Q9Y5G1 929 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 OR2A25A4D2G3 310 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 KRBA1A5PL33 1030 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 TMEM202A6NGA9 273 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 TMEM229AB2RXF0 380 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 LEFTY2O00292 366 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 NRG2O14511 850 aaPredicted RBP14.7□□□□□ -0.06
DDX56-201ENST00000258772 TEX28O15482 410 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 ATP6V1G1O75348 118 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 SH3BGRLO75368 114 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 BMP4P12644 408 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 GJA1P17302 382 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 GRK3P35626 688 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 HNF4AP41235 474 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 SFSWAPQ12872 951 aaKnown RBP14.7□□□□□ -0.06
DDX56-201ENST00000258772 RGNQ15493 299 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 HIST2H2ACQ16777 129 aaPredicted RBP14.7□□□□□ -0.06
DDX56-201ENST00000258772 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.7□□□□□ -0.06
DDX56-201ENST00000258772 ASTLQ6HA08 431 aaPredicted RBP14.7□□□□□ -0.06
DDX56-201ENST00000258772 GRHL2Q6ISB3 625 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 AGTRAPQ6RW13 159 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 SNX29P2Q8IUI4 249 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 C1orf52Q8N6N3 182 aaKnown RBP14.7□□□□□ -0.06
DDX56-201ENST00000258772 MAL2Q969L2 176 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 BTBD2Q9BX70 525 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 RUBCNLQ9H714 662 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 BRF2Q9HAW0 419 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 SGK2Q9HBY8 427 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 SLC25A13Q9UJS0 675 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 PCDHGA6Q9Y5G7 932 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 DOCK6Q96HP0 2047 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 TMEM247A6NEH6 219 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 GRM6O15303 877 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 PSIP1O75475 530 aaKnown RBP14.7□□□□□ -0.06
DDX56-201ENST00000258772 AP2A2O94973 939 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 LCKP06239 509 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 ANXA4P09525 319 aaPredicted RBP14.7□□□□□ -0.06
DDX56-201ENST00000258772 HSD3B1P14060 373 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 CD36P16671 472 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 HSD3B2P26439 372 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 AQP1P29972 269 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 ASMTP46597 345 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 CSNK2BP67870 215 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 ZNF648Q5T619 568 aaPredicted RBP14.7□□□□□ -0.06
DDX56-201ENST00000258772 ADNP2Q6IQ32 1131 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 GDPD4Q6W3E5 623 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 Q6ZVU0 165 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 HSD11B1LQ7Z5J1 315 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 FAM124AQ86V42 546 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 DNASE1L2Q92874 299 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 RPL3LQ92901 407 aaKnown RBP14.7□□□□□ -0.06
DDX56-201ENST00000258772 MED8Q96G25 268 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 OR4K3Q96R72 315 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 GABARAPL3Q9BY60 117 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 CEP44Q9C0F1 390 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 SMG9Q9H0W8 520 aaKnown RBP14.7□□□□□ -0.06
DDX56-201ENST00000258772 ADPRHL2Q9NX46 363 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 STOX2Q9P2F5 926 aaPredicted RBP14.7□□□□□ -0.06
DDX56-201ENST00000258772 CORO2BQ9UQ03 480 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 PADI2Q9Y2J8 665 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 PCM1Q15154 2024 aa14.7□□□□□ -0.06
DDX56-201ENST00000258772 COL4A6Q14031 1691 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 A0A1W2PQ67 120 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms