RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 TLE2Q04725 743 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 LAPTM5Q13571 262 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 HSDL1Q3SXM5 330 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 MEDAGQ5VYS4 303 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 DGLUCYQ7Z3D6 616 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 TMPRSS11BQ86T26 416 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 OR6K6Q8NGW6 343 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 EMID1Q96A84 441 aaPredicted RBP12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 PTERQ96BW5 349 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 CNTNAP3BQ96NU0 1288 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 RNF208Q9H0X6 261 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 ATG10Q9H0Y0 220 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 TFB2MQ9H5Q4 396 aaKnown RBP12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 XPNPEP1Q9NQW7 623 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 MED31Q9Y3C7 131 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 PCDHGB5Q9Y5G0 923 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 TEX13DA0A0J9YY54 714 aaPredicted RBP12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 SMIM30A4D0T7 59 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 TTC34A8MYJ7 566 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 PQBP1O60828 265 aaKnown RBP12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 TPPPO94811 219 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 ITPKBP27987 946 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 CHIT1Q13231 466 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 FBXO48Q5FWF7 155 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 KIAA0930Q6ICG6 404 aaPredicted RBP12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 SIMC1Q8NDZ2 872 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 ZNF563Q8TA94 476 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 PMEPA1Q969W9 287 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 SENP8Q96LD8 212 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 SMOXQ9NWM0 555 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 SMPD4Q9NXE4 827 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 NDOR1Q9UHB4 597 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 ZDHHC2Q9UIJ5 367 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 FAM159BA6NKW6 160 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 RHPN2P1A8MT19 583 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 TNFRSF10AO00220 468 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 PCDH17O14917 1159 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 TYROBPO43914 113 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 NDST3O95803 873 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 NMBRP28336 390 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 SCARB2Q14108 478 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 MAD2L1BPQ15013 274 aaPredicted RBP12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 FAM151BQ6UXP7 276 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 COMTD1Q86VU5 262 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 XYLT1Q86Y38 959 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 BEST4Q8NFU0 473 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 THRSPQ92748 146 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 TIFAQ96CG3 184 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 PCDHB9Q9Y5E1 797 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 NEMP2A6NFY4 417 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 XYLBO75191 536 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 KELP23276 732 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 DNAJB1P25685 340 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 TSTD2Q5T7W7 516 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 DCLRE1AQ6PJP8 1040 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 LBX2Q6XYB7 198 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 OTOP3Q7RTS5 596 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 PYROXD2Q8N2H3 581 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 ELMOD3Q96FG2 381 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 AGO3Q9H9G7 860 aaKnown RBP12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 HCN4Q9Y3Q4 1203 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 PCDHB3Q9Y5E6 796 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 ZNF536O15090 1300 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 PARP4Q9UKK3 1724 aaKnown RBP12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 IGKV6D-41A0A0C4DH26 115 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 ENDOUP21128 410 aaKnown RBP12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 EDNRAP25101 427 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 TNFSF9P41273 254 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 ZNF227Q86WZ6 799 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 NETO2Q8NC67 525 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 COQ8BQ96D53 544 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 SH3YL1Q96HL8 342 aaPredicted RBP12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 ARHGEF4Q9NR80 690 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 C14orf166Q9Y224 244 aaKnown RBP12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 HSPE1-MOB4S4R3N1 261 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 AFDNP55196 1824 aaKnown RBP12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 INPPL1O15357 1258 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 LCMT2O60294 686 aaKnown RBP12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 BCAS1O75363 584 aaPredicted RBP12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 USP2O75604 605 aaPredicted RBP12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 KRT33AO76009 404 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 CNTN5O94779 1100 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 ACVR2AP27037 513 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 DGKQP52824 942 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 CRISP3P54108 245 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 GDF10P55107 478 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 NDUFAF5Q5TEU4 345 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 MBLAC2Q68D91 279 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 RHBDF2Q6PJF5 856 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 TMEM151AQ8N4L1 468 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 ZBTB2Q8N680 514 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 ZMIZ2Q8NF64 920 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 OR8K5Q8NH50 307 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 TERB2Q8NHR7 220 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 CNIH3Q8TBE1 160 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 C5orf34Q96MH7 638 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 ZNF416Q9BWM5 594 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 ANKRD60Q9BZ19 345 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 ABCB8Q9NUT2 735 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms