RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 VRTNQ9H8Y1 702 aa19.27■□□□□ 0.68
SOX4-201ENST00000244745 SLITRK5O94991 958 aa19.27■□□□□ 0.68
SOX4-201ENST00000244745 C6orf47O95873 294 aa19.27■□□□□ 0.68
SOX4-201ENST00000244745 RPS13P62277 151 aaKnown RBP19.27■□□□□ 0.68
SOX4-201ENST00000244745 TXNL4AP83876 142 aaKnown RBP19.27■□□□□ 0.68
SOX4-201ENST00000244745 SEMA3AQ14563 771 aa19.27■□□□□ 0.68
SOX4-201ENST00000244745 PRAMEF14Q5SWL7 426 aa19.27■□□□□ 0.68
SOX4-201ENST00000244745 PRAMEF13Q5VWM6 474 aa19.27■□□□□ 0.68
SOX4-201ENST00000244745 DNAJB7Q7Z6W7 309 aaPredicted RBP19.27■□□□□ 0.68
SOX4-201ENST00000244745 CHST4Q8NCG5 386 aa19.27■□□□□ 0.68
SOX4-201ENST00000244745 STRA6Q9BX79 667 aa19.27■□□□□ 0.68
SOX4-201ENST00000244745 MMP27Q9H306 513 aa19.27■□□□□ 0.68
SOX4-201ENST00000244745 C4AP0C0L4 1744 aa19.27■□□□□ 0.68
SOX4-201ENST00000244745 C4BP0C0L5 1744 aa19.27■□□□□ 0.68
SOX4-201ENST00000244745 SMIM30A4D0T7 59 aa19.27■□□□□ 0.68
SOX4-201ENST00000244745 WNT9AO14904 365 aa19.27■□□□□ 0.68
SOX4-201ENST00000244745 T-ENOLP0DO92 83 aa19.27■□□□□ 0.68
SOX4-201ENST00000244745 ADAM15Q13444 863 aa19.27■□□□□ 0.68
SOX4-201ENST00000244745 AMZ2Q86W34 360 aa19.27■□□□□ 0.68
SOX4-201ENST00000244745 NUDT13Q86X67 352 aa19.27■□□□□ 0.68
SOX4-201ENST00000244745 SCML4Q8N228 414 aa19.27■□□□□ 0.68
SOX4-201ENST00000244745 BPIFB1Q8TDL5 484 aa19.27■□□□□ 0.68
SOX4-201ENST00000244745 SH3RF2Q8TEC5 729 aa19.27■□□□□ 0.68
SOX4-201ENST00000244745 ACDQ96AP0 544 aa19.27■□□□□ 0.68
SOX4-201ENST00000244745 FBXL21Q9UKT6 434 aa19.27■□□□□ 0.68
SOX4-201ENST00000244745 KAT6AQ92794 2004 aa19.27■□□□□ 0.68
SOX4-201ENST00000244745 PTPN2P17706 415 aa19.27■□□□□ 0.67
SOX4-201ENST00000244745 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.27■□□□□ 0.67
SOX4-201ENST00000244745 CD99L2Q8TCZ2 262 aa19.27■□□□□ 0.67
SOX4-201ENST00000244745 ALPK1Q96QP1 1244 aa19.27■□□□□ 0.67
SOX4-201ENST00000244745 MYH10P35580 1976 aa19.27■□□□□ 0.67
SOX4-201ENST00000244745 ANXA2P2A6NMY6 339 aa19.27■□□□□ 0.67
SOX4-201ENST00000244745 B3GALT2O43825 422 aa19.27■□□□□ 0.67
SOX4-201ENST00000244745 ANXA2P07355 339 aaKnown RBP19.27■□□□□ 0.67
SOX4-201ENST00000244745 GNG2P59768 71 aa19.27■□□□□ 0.67
SOX4-201ENST00000244745 GRB14Q14449 540 aa19.27■□□□□ 0.67
SOX4-201ENST00000244745 PIGGQ5H8A4 983 aa19.27■□□□□ 0.67
SOX4-201ENST00000244745 SLC15A4Q8N697 577 aa19.27■□□□□ 0.67
SOX4-201ENST00000244745 SMG7Q92540 1137 aaKnown RBP19.27■□□□□ 0.67
SOX4-201ENST00000244745 GPER1Q99527 375 aa19.27■□□□□ 0.67
SOX4-201ENST00000244745 DPAGT1Q9H3H5 408 aa19.27■□□□□ 0.67
SOX4-201ENST00000244745 FAM120CQ9NX05 1096 aaKnown RBP19.27■□□□□ 0.67
SOX4-201ENST00000244745 CCDC88AQ3V6T2 1871 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 ARVCFO00192 962 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 C8AP07357 584 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 ZNF267Q14586 743 aaPredicted RBP19.26■□□□□ 0.67
SOX4-201ENST00000244745 TOMM5Q8N4H5 51 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 PRICKLE1Q96MT3 831 aaPredicted RBP19.26■□□□□ 0.67
SOX4-201ENST00000244745 UPB1Q9UBR1 384 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 YIPF1Q9Y548 306 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 SRPRAP08240 638 aaKnown RBP19.26■□□□□ 0.67
SOX4-201ENST00000244745 RPS3P23396 243 aaKnown RBP eCLIP19.26■□□□□ 0.67
SOX4-201ENST00000244745 TMEM44Q2T9K0 475 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 FBXO42Q6P3S6 717 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 CEACAM20Q6UY09 585 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 NPAS3Q8IXF0 933 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 TP53INP2Q8IXH6 220 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 SLC15A3Q8IY34 581 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 ATP6V1C2Q8NEY4 427 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 GRHL3Q8TE85 626 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 AUTS2Q8WXX7 1259 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 RIPOR3Q96MK2 946 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 COMMD4Q9H0A8 199 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 SACM1LQ9NTJ5 587 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 ERVK-18Q9QC07 812 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 FUOMA2VDF0 154 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 DFNA5O60443 496 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 KRT33AO76009 404 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 PRAMEF12O95522 483 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 RB1P06400 928 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 ZNF806P0C7X5 589 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 SLC9A3P48764 834 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 AP1S2P56377 157 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 RPA4Q13156 261 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 GPR151Q8TDV0 419 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 TMEM80Q96HE8 168 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 C5orf34Q96MH7 638 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 ZNF382Q96SR6 550 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 GAL3ST1Q99999 423 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 EFCAB11Q9BUY7 163 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 MS4A12Q9NXJ0 267 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 MAT2AP31153 395 aaKnown RBP19.26■□□□□ 0.67
SOX4-201ENST00000244745 OR1E2P47887 323 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 NKX2-5P52952 324 aaPredicted RBP19.26■□□□□ 0.67
SOX4-201ENST00000244745 PRKCZQ05513 592 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 KCNAB2Q13303 367 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 CTC1Q2NKJ3 1217 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 WACQ9BTA9 647 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 PAK1IP1Q9NWT1 392 aaPredicted RBP19.26■□□□□ 0.67
SOX4-201ENST00000244745 TIAM2Q8IVF5 1701 aa19.26■□□□□ 0.67
SOX4-201ENST00000244745 A0A0U1RQF3 1178 aa19.25■□□□□ 0.67
SOX4-201ENST00000244745 ANKFN1Q8N957 763 aa19.25■□□□□ 0.67
SOX4-201ENST00000244745 TCF7L1Q9HCS4 588 aa19.25■□□□□ 0.67
SOX4-201ENST00000244745 TIGARQ9NQ88 270 aa19.25■□□□□ 0.67
SOX4-201ENST00000244745 C14orf119Q9NWQ9 140 aa19.25■□□□□ 0.67
SOX4-201ENST00000244745 DNAJC27Q9NZQ0 273 aa19.25■□□□□ 0.67
SOX4-201ENST00000244745 C12orf71A8MTZ7 269 aa19.25■□□□□ 0.67
SOX4-201ENST00000244745 EEDO75530 441 aaKnown RBP19.25■□□□□ 0.67
SOX4-201ENST00000244745 CSF2P04141 144 aa19.25■□□□□ 0.67
SOX4-201ENST00000244745 OR8J3Q8NGG0 315 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms