RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 SYT12Q8IV01 421 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 PIK3R3Q92569 461 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 TAS2R16Q9NYV7 291 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 TBC1D24Q9ULP9 559 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 PADI2Q9Y2J8 665 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 FCF1Q9Y324 198 aaKnown RBP14.99□□□□□ -0.01
DDX55-201ENST00000238146 PCDHGA2Q9Y5H1 932 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 NPIPB8E9PQR5 432 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 TNFRSF11BO00300 401 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 AP3D1O14617 1153 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 SYN3O14994 580 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 DUSP11O75319 330 aaKnown RBP14.99□□□□□ -0.01
DDX55-201ENST00000238146 AKR1A1P14550 325 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 CXCR2P25025 360 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 SOX6P35712 828 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 RHOAP61586 193 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 ZXDBP98169 803 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 DMPKQ09013 629 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 DUSP4Q13115 394 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 PPIGQ13427 754 aaKnown RBP eCLIP14.99□□□□□ -0.014e-6■□□□□ 11.2
DDX55-201ENST00000238146 MRPL58Q14197 206 aaKnown RBP14.99□□□□□ -0.01
DDX55-201ENST00000238146 ARMC12Q5T9G4 340 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 CSGALNACT1Q8TDX6 532 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 MAL2Q969L2 176 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 SNX18Q96RF0 628 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 RGS17Q9UGC6 210 aaPredicted RBP14.99□□□□□ -0.01
DDX55-201ENST00000238146 CRLS1Q9UJA2 301 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 WBP11Q9Y2W2 641 aaKnown RBP14.99□□□□□ -0.01
DDX55-201ENST00000238146 GUCY1B2O75343 617 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 MFN2O95140 757 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 COX7A2P14406 83 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 OLR1P78380 273 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 TP53BP2Q13625 1128 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 CHRNA6Q15825 494 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 CHST9Q7L1S5 443 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 NRARPQ7Z6K4 114 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 RTN4RL1Q86UN2 441 aaPredicted RBP14.98□□□□□ -0.01
DDX55-201ENST00000238146 PAF1Q8N7H5 531 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 L3MBTL4Q8NA19 623 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 MYO19Q96H55 970 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 CDK5RAP1Q96SZ6 601 aaKnown RBP14.98□□□□□ -0.01
DDX55-201ENST00000238146 KCNS3Q9BQ31 491 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 HTATIP2Q9BUP3 242 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.98□□□□□ -0.01
DDX55-201ENST00000238146 CHST8Q9H2A9 424 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 CCDC177Q9NQR7 707 aaPredicted RBP14.98□□□□□ -0.01
DDX55-201ENST00000238146 NDUFAF4Q9P032 175 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 FZD4Q9ULV1 537 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 BTBD3Q9Y2F9 522 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 PCDHB11Q9Y5F2 797 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 SNX8Q9Y5X2 465 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 VWA8A3KMH1 1905 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 M0R129 80 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 CLDN7O95471 211 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 LAMP1P11279 417 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 MZF1P28698 734 aaPredicted RBP14.98□□□□□ -0.01
DDX55-201ENST00000238146 FRG2Q64ET8 278 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 LRRC70Q7Z2Q7 622 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 GATAD2AQ86YP4 633 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 DENND6BQ8NEG7 585 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 OR10G2Q8NGC3 310 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 OR8J2Q8NGG1 315 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 OR6K2Q8NGY2 324 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 CRELD1Q96HD1 420 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 FRG2BQ96QU4 278 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 OR2A14Q96R47 310 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 OR5M11Q96RB7 305 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 NIPSNAP1Q9BPW8 284 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 DOHHQ9BU89 302 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 CCDC32Q9BV29 185 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 GKN1Q9NS71 199 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 FAM120CQ9NX05 1096 aaKnown RBP14.98□□□□□ -0.01
DDX55-201ENST00000238146 ADPRHL2Q9NX46 363 aa14.98□□□□□ -0.01
DDX55-201ENST00000238146 OR6C75A6NL08 312 aa14.97□□□□□ -0.01
DDX55-201ENST00000238146 GCM2O75603 506 aaPredicted RBP14.97□□□□□ -0.01
DDX55-201ENST00000238146 ADRA2AP08913 450 aa14.97□□□□□ -0.01
DDX55-201ENST00000238146 ACPPP15309 386 aa14.97□□□□□ -0.01
DDX55-201ENST00000238146 PCSK2P16519 638 aa14.97□□□□□ -0.01
DDX55-201ENST00000238146 BPIP17213 487 aa14.97□□□□□ -0.01
DDX55-201ENST00000238146 TNFRSF1BP20333 461 aa14.97□□□□□ -0.01
DDX55-201ENST00000238146 CORO1AP31146 461 aaKnown RBP14.97□□□□□ -0.01
DDX55-201ENST00000238146 EIF4HQ15056 248 aaKnown RBP14.97□□□□□ -0.01
DDX55-201ENST00000238146 PTCHD3Q3KNS1 767 aa14.97□□□□□ -0.01
DDX55-201ENST00000238146 C19orf48Q6RUI8 117 aa14.97□□□□□ -0.01
DDX55-201ENST00000238146 TRPV1Q8NER1 839 aa14.97□□□□□ -0.01
DDX55-201ENST00000238146 OR52J3Q8NH60 311 aa14.97□□□□□ -0.01
DDX55-201ENST00000238146 SPPL2AQ8TCT8 520 aa14.97□□□□□ -0.01
DDX55-201ENST00000238146 UTP15Q8TED0 518 aaKnown RBP14.97□□□□□ -0.01
DDX55-201ENST00000238146 FCRL1Q96LA6 429 aa14.97□□□□□ -0.01
DDX55-201ENST00000238146 SLC30A2Q9BRI3 323 aa14.97□□□□□ -0.01
DDX55-201ENST00000238146 CCM2Q9BSQ5 444 aa14.97□□□□□ -0.01
DDX55-201ENST00000238146 GPR62Q9BZJ7 368 aa14.97□□□□□ -0.01
DDX55-201ENST00000238146 DDX28Q9NUL7 540 aaKnown RBP14.97□□□□□ -0.01
DDX55-201ENST00000238146 SLC6A14Q9UN76 642 aa14.97□□□□□ -0.01
DDX55-201ENST00000238146 CFL2Q9Y281 166 aa14.97□□□□□ -0.01
DDX55-201ENST00000238146 GLYATL1P3A0A0U1RQE8 302 aa14.97□□□□□ -0.01
DDX55-201ENST00000238146 SLC38A8A6NNN8 435 aa14.97□□□□□ -0.01
DDX55-201ENST00000238146 PLK4O00444 970 aa14.97□□□□□ -0.01
DDX55-201ENST00000238146 CSTF3Q12996 717 aaKnown RBP14.97□□□□□ -0.01
DDX55-201ENST00000238146 GPR50Q13585 617 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms