RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 NPIPB15A6NHN6 443 aaPredicted RBP16.62■□□□□ 0.25
H2AFV-201ENST00000222690 OR2AG2A6NM03 316 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 LOC110117498-PIK3R3F6TDL0 507 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 M0R082 166 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 GFRA2O00451 464 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 SSX4O60224 188 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 KRT75O95678 551 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 METTL4Q8N3J2 472 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 VPS37AQ8NEZ2 397 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 KBTBD8Q8NFY9 601 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 CSGALNACT1Q8TDX6 532 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 GGHQ92820 318 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 FOXJ1Q92949 421 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 P2RY13Q9BPV8 354 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 BTBD2Q9BX70 525 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 PCDHGB3Q9Y5G1 929 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 METTL15A6NJ78 407 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 CLDN24A6NM45 220 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 TBKBP1A7MCY6 615 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 CHRM5P08912 532 aaPredicted RBP16.62■□□□□ 0.25
H2AFV-201ENST00000222690 MBTPS1Q14703 1052 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 CPTPQ5TA50 214 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 DEPDC1Q5TB30 811 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 LRRC66Q68CR7 880 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 CBLL1Q75N03 491 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 NAGSQ8N159 534 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 TCAIMQ8N3R3 496 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 OR5AK3PQ8NH89 298 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 SPATA17Q96L03 361 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 SAGE2PA6NJ88 616 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 ZDHHC11BP0C7U3 371 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 LRRC74AQ0VAA2 488 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 TRIM60Q495X7 471 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 ERICH5Q6P6B1 374 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 LGI4Q8N135 537 aa16.62■□□□□ 0.25
H2AFV-201ENST00000222690 TP63Q9H3D4 680 aaPredicted RBP16.62■□□□□ 0.25
H2AFV-201ENST00000222690 SAP18O00422 153 aaKnown RBP16.61■□□□□ 0.25
H2AFV-201ENST00000222690 CTDSP2O14595 271 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 SH3BP5O60239 455 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 ANXA4P09525 319 aaPredicted RBP16.61■□□□□ 0.25
H2AFV-201ENST00000222690 OR56A5P0C7T3 313 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 SOX6P35712 828 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 TUBA1BP68363 451 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 FAM180BQ6P0A1 224 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 TUBA1AQ71U36 451 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 TAGAPQ8N103 731 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 C1orf52Q8N6N3 182 aaKnown RBP16.61■□□□□ 0.25
H2AFV-201ENST00000222690 FBLIM1Q8WUP2 373 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 SLC22A12Q96S37 553 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 MS4A12Q9NXJ0 267 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 VPS29Q9UBQ0 182 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 PCDH7O60245 1069 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 CYBAP13498 195 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 RPS3P23396 243 aaKnown RBP eCLIP16.61■□□□□ 0.253e-6■□□□□ 11.1
H2AFV-201ENST00000222690 CTGFP29279 349 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 SOAT1P35610 550 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 ITGA1P56199 1179 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 AP1S1P61966 158 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 SRSF11Q05519 484 aaKnown RBP16.61■□□□□ 0.25
H2AFV-201ENST00000222690 PPIGQ13427 754 aaKnown RBP eCLIP16.61■□□□□ 0.25
H2AFV-201ENST00000222690 TSTQ16762 297 aaKnown RBP16.61■□□□□ 0.25
H2AFV-201ENST00000222690 ZXDCQ2QGD7 858 aaPredicted RBP16.61■□□□□ 0.25
H2AFV-201ENST00000222690 FAM217AQ8IXS0 508 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 CACTIN-AS1Q8N1I8 211 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 ELMOD1Q8N336 334 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 OR4A15Q8NGL6 344 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 UPF1Q92900 1129 aaKnown RBP eCLIP16.61■□□□□ 0.252e-12■■■■□ 25.3
H2AFV-201ENST00000222690 TESCQ96BS2 214 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 C2orf49Q9BVC5 232 aaPredicted RBP16.61■□□□□ 0.25
H2AFV-201ENST00000222690 NEK6Q9HC98 313 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 ACSL6Q9UKU0 697 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 ERVW-1Q9UQF0 538 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 YY2O15391 372 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 SEPT4O43236 478 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 STK19P49842 368 aaPredicted RBP16.61■□□□□ 0.25
H2AFV-201ENST00000222690 SMARCB1Q12824 385 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 MTA1Q13330 715 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 NAE1Q13564 534 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 CHST9Q7L1S5 443 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 ARL14EPQ8N8R7 260 aaPredicted RBP16.61■□□□□ 0.25
H2AFV-201ENST00000222690 IL4I1Q96RQ9 567 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 NIPSNAP1Q9BPW8 284 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 QPCTLQ9NXS2 382 aa16.61■□□□□ 0.25
H2AFV-201ENST00000222690 CLCA1A8K7I4 914 aa16.6■□□□□ 0.25
H2AFV-201ENST00000222690 J3KTA2 159 aa16.6■□□□□ 0.25
H2AFV-201ENST00000222690 FZD6O60353 706 aa16.6■□□□□ 0.25
H2AFV-201ENST00000222690 TAB1Q15750 504 aa16.6■□□□□ 0.25
H2AFV-201ENST00000222690 LRIT3Q3SXY7 679 aa16.6■□□□□ 0.25
H2AFV-201ENST00000222690 DBF4BQ8NFT6 615 aa16.6■□□□□ 0.25
H2AFV-201ENST00000222690 PLD4Q96BZ4 506 aa16.6■□□□□ 0.25
H2AFV-201ENST00000222690 CDADC1Q9BWV3 514 aa16.6■□□□□ 0.25
H2AFV-201ENST00000222690 MAP4K5Q9Y4K4 846 aa16.6■□□□□ 0.25
H2AFV-201ENST00000222690 HTTP42858 3142 aa16.6■□□□□ 0.25
H2AFV-201ENST00000222690 H7C4K7 107 aa16.6■□□□□ 0.25
H2AFV-201ENST00000222690 TMEM189-UBE2V1I3L0A0 370 aa16.6■□□□□ 0.25
H2AFV-201ENST00000222690 IDH3BO43837 385 aa16.6■□□□□ 0.25
H2AFV-201ENST00000222690 PRAMEF4O60810 478 aa16.6■□□□□ 0.25
H2AFV-201ENST00000222690 ETFAP13804 333 aa16.6■□□□□ 0.25
H2AFV-201ENST00000222690 CYP2A7P20853 494 aa16.6■□□□□ 0.25
H2AFV-201ENST00000222690 AOAHP28039 575 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms