RNA–Protein interactions for RNA: ENST00000222305.7

USF2-201, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF2, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-201ENST00000222305 NUDT22Q9BRQ3 303 aa22.04■■□□□ 1.12
USF2-201ENST00000222305 SYNDIG1Q9H7V2 258 aa22.04■■□□□ 1.12
USF2-201ENST00000222305 SYNPO2LQ9H987 977 aa22.04■■□□□ 1.12
USF2-201ENST00000222305 ATXN7L1Q9ULK2 861 aaPredicted RBP22.04■■□□□ 1.12
USF2-201ENST00000222305 A0A1W2PQM1 296 aa22.03■■□□□ 1.12
USF2-201ENST00000222305 RPLP0P05388 317 aaKnown RBP22.03■■□□□ 1.12
USF2-201ENST00000222305 CKMT2P17540 419 aa22.03■■□□□ 1.12
USF2-201ENST00000222305 NXNQ6DKJ4 435 aa22.03■■□□□ 1.12
USF2-201ENST00000222305 RNF165Q6ZSG1 346 aa22.03■■□□□ 1.12
USF2-201ENST00000222305 Q6ZSR9 355 aa22.03■■□□□ 1.12
USF2-201ENST00000222305 VN1R5Q7Z5H4 357 aa22.03■■□□□ 1.12
USF2-201ENST00000222305 ZUFSPQ96AP4 578 aa22.03■■□□□ 1.12
USF2-201ENST00000222305 ZDHHC12Q96GR4 267 aa22.03■■□□□ 1.12
USF2-201ENST00000222305 TRAPPC9Q96Q05 1148 aa22.03■■□□□ 1.12
USF2-201ENST00000222305 ACPTQ9BZG2 426 aa22.03■■□□□ 1.12
USF2-201ENST00000222305 NT5DC2Q9H857 520 aa22.03■■□□□ 1.12
USF2-201ENST00000222305 TCF7L2Q9NQB0 619 aa22.03■■□□□ 1.12
USF2-201ENST00000222305 C1GALT1Q9NS00 363 aa22.03■■□□□ 1.12
USF2-201ENST00000222305 ANKMY1Q9P2S6 941 aa22.03■■□□□ 1.12
USF2-201ENST00000222305 KLK4Q9Y5K2 254 aa22.03■■□□□ 1.12
USF2-201ENST00000222305 TLCD2A6NGC4 264 aa22.02■■□□□ 1.12
USF2-201ENST00000222305 SLC9B1P1A6NJY1 282 aa22.02■■□□□ 1.12
USF2-201ENST00000222305 CTSVO60911 334 aa22.02■■□□□ 1.12
USF2-201ENST00000222305 SH3BGRLO75368 114 aa22.02■■□□□ 1.12
USF2-201ENST00000222305 SCTRP47872 440 aa22.02■■□□□ 1.12
USF2-201ENST00000222305 RPS13P62277 151 aaKnown RBP22.02■■□□□ 1.12
USF2-201ENST00000222305 TUBB3Q13509 450 aa22.02■■□□□ 1.12
USF2-201ENST00000222305 IMPG1Q17R60 797 aa22.02■■□□□ 1.12
USF2-201ENST00000222305 LSM12Q3MHD2 195 aaKnown RBP22.02■■□□□ 1.12
USF2-201ENST00000222305 ACAD11Q709F0 780 aa22.02■■□□□ 1.12
USF2-201ENST00000222305 TMPRSS9Q7Z410 1059 aa22.02■■□□□ 1.12
USF2-201ENST00000222305 TRIM46Q7Z4K8 759 aa22.02■■□□□ 1.12
USF2-201ENST00000222305 PLXDC1Q8IUK5 500 aa22.02■■□□□ 1.12
USF2-201ENST00000222305 CCDC197Q8NCU1 140 aa22.02■■□□□ 1.12
USF2-201ENST00000222305 TUBGCP3Q96CW5 907 aa22.02■■□□□ 1.12
USF2-201ENST00000222305 PITHD1Q9GZP4 211 aaPredicted RBP22.02■■□□□ 1.12
USF2-201ENST00000222305 AKTIPQ9H8T0 292 aa22.02■■□□□ 1.12
USF2-201ENST00000222305 DMRT3Q9NQL9 472 aa22.02■■□□□ 1.12
USF2-201ENST00000222305 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.02■■□□□ 1.12
USF2-201ENST00000222305 APOBEC2Q9Y235 224 aaKnown RBP22.02■■□□□ 1.12
USF2-201ENST00000222305 ARL2BPQ9Y2Y0 163 aa22.02■■□□□ 1.12
USF2-201ENST00000222305 CCL27Q9Y4X3 112 aa22.02■■□□□ 1.12
USF2-201ENST00000222305 MN1Q10571 1320 aaPredicted RBP22.02■■□□□ 1.12
USF2-201ENST00000222305 IGHV5-51A0A0C4DH38 117 aa22.02■■□□□ 1.11
USF2-201ENST00000222305 ANKDD1BA6NHY2 528 aa22.02■■□□□ 1.11
USF2-201ENST00000222305 RASSF9O75901 435 aa22.02■■□□□ 1.11
USF2-201ENST00000222305 STATHP02808 62 aa22.02■■□□□ 1.11
USF2-201ENST00000222305 EZRP15311 586 aaKnown RBP22.02■■□□□ 1.11
USF2-201ENST00000222305 GABPB1Q06547 395 aaPredicted RBP22.02■■□□□ 1.11
USF2-201ENST00000222305 NAA25Q14CX7 972 aa22.02■■□□□ 1.11
USF2-201ENST00000222305 SNAP47Q5SQN1 464 aa22.02■■□□□ 1.11
USF2-201ENST00000222305 WDR74Q6RFH5 385 aaPredicted RBP22.02■■□□□ 1.11
USF2-201ENST00000222305 ALYREFQ86V81 257 aaKnown RBP22.02■■□□□ 1.11
USF2-201ENST00000222305 CACNA2D3Q8IZS8 1091 aa22.02■■□□□ 1.11
USF2-201ENST00000222305 C19orf47Q8N9M1 422 aaKnown RBP22.02■■□□□ 1.11
USF2-201ENST00000222305 CCT7Q99832 543 aa22.02■■□□□ 1.11
USF2-201ENST00000222305 RHBGQ9H310 441 aa22.02■■□□□ 1.11
USF2-201ENST00000222305 LRRN3Q9H3W5 708 aa22.02■■□□□ 1.11
USF2-201ENST00000222305 PFDN4Q9NQP4 134 aa22.02■■□□□ 1.11
USF2-201ENST00000222305 A0A0J9YVX5 310 aa22.01■■□□□ 1.11
USF2-201ENST00000222305 E9PBE3 544 aa22.01■■□□□ 1.11
USF2-201ENST00000222305 SLC28A1O00337 649 aa22.01■■□□□ 1.11
USF2-201ENST00000222305 RGS14O43566 566 aa22.01■■□□□ 1.11
USF2-201ENST00000222305 KLHL41O60662 606 aa22.01■■□□□ 1.11
USF2-201ENST00000222305 PEX11AO75192 247 aa22.01■■□□□ 1.11
USF2-201ENST00000222305 ETHE1O95571 254 aa22.01■■□□□ 1.11
USF2-201ENST00000222305 C9P02748 559 aa22.01■■□□□ 1.11
USF2-201ENST00000222305 CSTF3Q12996 717 aaKnown RBP22.01■■□□□ 1.11
USF2-201ENST00000222305 NR6A1Q15406 480 aa22.01■■□□□ 1.11
USF2-201ENST00000222305 GALNTL6Q49A17 601 aa22.01■■□□□ 1.11
USF2-201ENST00000222305 FBXO42Q6P3S6 717 aa22.01■■□□□ 1.11
USF2-201ENST00000222305 LARP4Q71RC2 724 aaKnown RBP eCLIP22.01■■□□□ 1.112e-9■■□□□ 11.5
USF2-201ENST00000222305 CD180Q99467 661 aa22.01■■□□□ 1.11
USF2-201ENST00000222305 SARGQ9BW04 601 aa22.01■■□□□ 1.11
USF2-201ENST00000222305 FAM60AQ9NP50 221 aa22.01■■□□□ 1.11
USF2-201ENST00000222305 RIC8BQ9NVN3 520 aa22.01■■□□□ 1.11
USF2-201ENST00000222305 PILRAQ9UKJ1 303 aa22.01■■□□□ 1.11
USF2-201ENST00000222305 SLC12A4Q9UP95 1085 aa22.01■■□□□ 1.11
USF2-201ENST00000222305 TSC22D4Q9Y3Q8 395 aa22.01■■□□□ 1.11
USF2-201ENST00000222305 PCDHGA4Q9Y5G9 962 aa22.01■■□□□ 1.11
USF2-201ENST00000222305 ZFHX2Q9C0A1 2572 aaPredicted RBP22■■□□□ 1.11
USF2-201ENST00000222305 LSM1O15116 133 aaKnown RBP22■■□□□ 1.11
USF2-201ENST00000222305 TGFB1P01137 390 aa22■■□□□ 1.11
USF2-201ENST00000222305 ACP1P24666 158 aa22■■□□□ 1.11
USF2-201ENST00000222305 RPS15AP62244 130 aaKnown RBP22■■□□□ 1.11
USF2-201ENST00000222305 ZNF33BQ06732 778 aa22■■□□□ 1.11
USF2-201ENST00000222305 CACHD1Q5VU97 1274 aa22■■□□□ 1.11
USF2-201ENST00000222305 HOMEZQ8IX15 550 aa22■■□□□ 1.11
USF2-201ENST00000222305 TBC1D19Q8N5T2 526 aa22■■□□□ 1.11
USF2-201ENST00000222305 MFSD9Q8NBP5 474 aa22■■□□□ 1.11
USF2-201ENST00000222305 ACTRT2Q8TDY3 377 aa22■■□□□ 1.11
USF2-201ENST00000222305 BRF2Q9HAW0 419 aa22■■□□□ 1.11
USF2-201ENST00000222305 HEY2Q9UBP5 337 aa22■■□□□ 1.11
USF2-201ENST00000222305 COL27A1Q8IZC6 1860 aaPredicted RBP22■■□□□ 1.11
USF2-201ENST00000222305 SERTM1A2A2V5 107 aa21.99■■□□□ 1.11
USF2-201ENST00000222305 FOXE1O00358 373 aaPredicted RBP21.99■■□□□ 1.11
USF2-201ENST00000222305 CBFA2T3O75081 653 aa21.99■■□□□ 1.11
USF2-201ENST00000222305 CPNE6O95741 557 aa21.99■■□□□ 1.11
USF2-201ENST00000222305 TBX6O95947 436 aaPredicted RBP21.99■■□□□ 1.11
USF2-201ENST00000222305 SERPIND1P05546 499 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms