RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 NR2C1P13056 603 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 CD1DP15813 335 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 CCT3P49368 545 aaKnown RBP10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 ARFIP1P53367 373 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 FRMD7Q6ZUT3 714 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 DPPA4Q7L190 304 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 TMEM135Q86UB9 458 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 CSNK1A1LQ8N752 337 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 OR7A2PQ8NGA2 310 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 SNX33Q8WV41 574 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 TOE1Q96GM8 510 aaKnown RBP10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 PTCHD1Q96NR3 888 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 PREBQ9HCU5 417 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 MARCH5Q9NX47 278 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 ZDHHC2Q9UIJ5 367 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 PSAT1Q9Y617 370 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 NUMBLQ9Y6R0 609 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 TP53I11O14683 189 aa10.02□□□□□ -0.8
NIPAL3-201ENST00000003912 HCN1O60741 890 aa10.02□□□□□ -0.8
NIPAL3-201ENST00000003912 TRAPPC6AO75865 159 aa10.02□□□□□ -0.8
NIPAL3-201ENST00000003912 OR5F1O95221 314 aa10.02□□□□□ -0.8
NIPAL3-201ENST00000003912 FHP07954 510 aa10.02□□□□□ -0.8
NIPAL3-201ENST00000003912 HSD3B1P14060 373 aa10.02□□□□□ -0.8
NIPAL3-201ENST00000003912 HSD3B2P26439 372 aa10.02□□□□□ -0.8
NIPAL3-201ENST00000003912 SLC6A4P31645 630 aa10.02□□□□□ -0.8
NIPAL3-201ENST00000003912 GJA4P35212 333 aa10.02□□□□□ -0.8
NIPAL3-201ENST00000003912 TMED10P49755 219 aaKnown RBP10.02□□□□□ -0.8
NIPAL3-201ENST00000003912 WDR4P57081 412 aaKnown RBP10.02□□□□□ -0.8
NIPAL3-201ENST00000003912 BNIP1Q12981 228 aa10.02□□□□□ -0.8
NIPAL3-201ENST00000003912 LPAL2Q16609 132 aa10.02□□□□□ -0.8
NIPAL3-201ENST00000003912 USP53Q70EK8 1073 aa10.02□□□□□ -0.8
NIPAL3-201ENST00000003912 KRT77Q7Z794 578 aa10.02□□□□□ -0.8
NIPAL3-201ENST00000003912 IGDCC3Q8IVU1 814 aa10.02□□□□□ -0.8
NIPAL3-201ENST00000003912 OR2AJ1Q8NGZ0 328 aa10.02□□□□□ -0.8
NIPAL3-201ENST00000003912 RHBDD1Q8TEB9 315 aa10.02□□□□□ -0.8
NIPAL3-201ENST00000003912 DPH7Q9BTV6 452 aa10.02□□□□□ -0.8
NIPAL3-201ENST00000003912 APOOQ9BUR5 198 aa10.02□□□□□ -0.8
NIPAL3-201ENST00000003912 IFT27Q9BW83 186 aa10.02□□□□□ -0.8
NIPAL3-201ENST00000003912 HHATLQ9HCP6 504 aa10.02□□□□□ -0.8
NIPAL3-201ENST00000003912 FADS3Q9Y5Q0 445 aa10.02□□□□□ -0.8
NIPAL3-201ENST00000003912 AP4B1Q9Y6B7 739 aa10.02□□□□□ -0.8
NIPAL3-201ENST00000003912 PCDHGA12O60330 932 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 PGM3O95394 542 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 JUPP14923 745 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 STAT5AP42229 794 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 ATP12AP54707 1039 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 TBPL1P62380 186 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 MEF2AQ02078 507 aaPredicted RBP10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 PCDH1Q08174 1060 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 ZNF267Q14586 743 aaPredicted RBP10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 FITM2Q8N6M3 262 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 ADAMTS18Q8TE60 1221 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 RNF38Q9H0F5 515 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 ARHGEF3Q9NR81 526 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 NFKBIL1Q9UBC1 381 aaPredicted RBP10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 HCN2Q9UL51 889 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 RIMKLBQ9ULI2 386 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 STRCP1A6NGW2 1772 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 TPST2O60704 377 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 SDC3O75056 442 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 THRBP10828 461 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 NCK1P16333 377 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 CD6P30203 668 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 HOXA9P31269 272 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 RAB28P51157 221 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 SIM2Q14190 667 aaPredicted RBP10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 TMEM44Q2T9K0 475 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 TCTE1Q5JU00 501 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 COLEC12Q5KU26 742 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 NPAS3Q8IXF0 933 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 RBM12BQ8IXT5 1001 aaKnown RBP10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 SLC25A36Q96CQ1 311 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 CGREF1Q99674 301 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 GEMIN8Q9NWZ8 242 aaKnown RBP10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 TAS2R9Q9NYW1 312 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 PRSS51A0A1B0GVH4 220 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 H3BNC9 293 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 H7C0S8 307 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 C8orf89P0DMQ9 161 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 RAP2AP10114 183 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 RNH1P13489 461 aaKnown RBP10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 CSNK1DP48730 415 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 PDX1P52945 283 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 LRP8Q14114 963 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 Q6ZSR6 202 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 GPR65Q8IYL9 337 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 METTL27Q8N6F8 245 aaPredicted RBP10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 AP3S1Q92572 193 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 GFM1Q96RP9 751 aaKnown RBP10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 EBF4Q9BQW3 602 aa10.02□□□□□ -0.81
NIPAL3-201ENST00000003912 A6NCN8 305 aa10.01□□□□□ -0.81
NIPAL3-201ENST00000003912 ARHGEF33A8MVX0 844 aa10.01□□□□□ -0.81
NIPAL3-201ENST00000003912 VSTM5A8MXK1 200 aa10.01□□□□□ -0.81
NIPAL3-201ENST00000003912 RFXAPO00287 272 aa10.01□□□□□ -0.81
NIPAL3-201ENST00000003912 ACADLP28330 430 aa10.01□□□□□ -0.81
NIPAL3-201ENST00000003912 ZNF41P51814 821 aaPredicted RBP10.01□□□□□ -0.81
NIPAL3-201ENST00000003912 ZNF252P-AS1Q0IIN9 211 aa10.01□□□□□ -0.81
NIPAL3-201ENST00000003912 GRM7Q14831 915 aa10.01□□□□□ -0.81
NIPAL3-201ENST00000003912 RAB6CQ53S08 254 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms