RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Izumo4D3Z690 227 aa21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Spdye4cI6XKQ3 339 aa21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Reps1O54916 795 aa21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 P06324 132 aa21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 GhrP16882 650 aa21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Hoxb9P20615 250 aa21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Ephx2P34914 554 aa21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 TfamP40630 243 aa21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Stox2Q499E5 926 aa21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Rnf145Q5SWK7 663 aa21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Klf4Q60793 483 aa21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Muc19Q6JHY2 733 aa21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Fbxl19Q6PB97 674 aa21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Mapre3Q6PER3 281 aa21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Cdh24Q6PFX6 781 aa21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Fbxl3Q8C4V4 428 aa21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Cdkl1Q8CEQ0 352 aa21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Gtf2h3Q8VD76 309 aa21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Pcdhb3Q91XZ7 784 aa21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Slc35b2Q91ZN5 431 aa21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Cstf3Q99LI7 717 aaKnown RBP21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Pinx1Q9CZX5 332 aaKnown RBP21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Hormad1Q9D5T7 392 aa21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Dhx34Q9DBV3 1145 aa21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Ap3m1Q9JKC8 418 aa21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Akap8lQ9R0L7 642 aaKnown RBP21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 FarsbQ9WUA2 589 aaKnown RBP21.87■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Gm14862B1AV28 81 aa21.86■■□□□ 1.09
Scn1b-201ENSMUST00000098548 SelenonD3Z2R5 557 aa21.86■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Spaca6E9Q8Q8 339 aa21.86■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Serpinb9eO08806 377 aa21.86■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Eif1adQ3THJ3 170 aaKnown RBP21.86■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Lrrc58Q3UGP9 366 aa21.86■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Slc22a23Q3UHH2 689 aa21.86■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Fgfr3Q61851 801 aa21.86■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Atp4aQ64436 1033 aa21.86■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Cpsf6Q6NVF9 551 aaKnown RBP21.86■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Ptx4Q6RUU0 478 aa21.86■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Zpbp2Q6X786 326 aa21.86■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Nrbf2Q8VCQ3 287 aa21.86■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Olfr1093Q8VF14 322 aa21.86■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Mrpl45Q9D0Q7 306 aaKnown RBP21.86■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Rpl38Q9JJI8 70 aaKnown RBP21.86■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Scamp4Q9JKV5 230 aa21.86■■□□□ 1.09
Scn1b-201ENSMUST00000098548 PrepQ9QUR6 710 aa21.86■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Psmd13Q9WVJ2 376 aa21.86■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Slc22a4Q9Z306 553 aa21.86■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Zfp352A2AML7 551 aa21.85■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Gm28043E0CXC2 719 aa21.85■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Sbk2P0C5K1 362 aa21.85■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Cyp2a4P15392 494 aa21.85■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Cyp2a5P20852 494 aa21.85■■□□□ 1.09
Scn1b-201ENSMUST00000098548 UoxP25688 303 aa21.85■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Rab23P35288 237 aa21.85■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Ppp3cbP48453 525 aa21.85■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Entpd1P55772 510 aa21.85■■□□□ 1.09
Scn1b-201ENSMUST00000098548 MazP56671 477 aaKnown RBP21.85■■□□□ 1.09
Scn1b-201ENSMUST00000098548 OstnP61364 130 aa21.85■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Ufm1P61961 85 aa21.85■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Cpt1aP97742 773 aa21.85■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Slc45a4Q0P5V9 785 aa21.85■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Ccdc160Q3UYG1 323 aa21.85■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Olfr463Q5SW49 311 aa21.85■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Olfr462Q5SW50 311 aa21.85■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Rbbp8Q80YR6 893 aa21.85■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Pced1bQ8BGX1 433 aaKnown RBP21.85■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Tspan12Q8BKT6 305 aa21.85■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Olfr353Q8VGK0 311 aa21.85■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Lrrc26Q91W20 331 aa21.85■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Olfr701Q9D3U9 316 aa21.85■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Tnfsf14Q9QYH9 239 aa21.85■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Gm29776A0A286YEC0 699 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Tgm7A2ART8 616 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Olfr1253A2AUA2 318 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Vmn2r7E9PYL5 915 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Vmn2r3H3BJ88 915 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Vmn2r6H3BK29 913 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Kcnk1O08581 336 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Neu1O35657 409 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 FhitO89106 150 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Phxr1P15973 60 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Lrrn4P59383 733 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Rpl10lP86048 214 aaKnown RBP21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Abraxas2Q3TCJ1 415 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Krt2Q3TTY5 707 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Pfkfb4Q6DTY7 469 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Serpina3aQ6P4P1 422 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Rpl10Q6ZWV3 214 aaKnown RBP21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Olfr1251Q7TQZ3 318 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Trim50Q810I2 483 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Cpped1Q8BFS6 312 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 D3Ertd751eQ8BGN2 192 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Tyw1Q8BJM7 721 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Gtf2a1lQ8R4I4 468 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Olfr690Q8VH18 315 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Impa2Q91UZ5 290 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Rab28Q99KL7 221 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 DhddsQ99KU1 333 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 Gm16286Q9CQX6 220 aa21.84■■□□□ 1.09
Scn1b-201ENSMUST00000098548 2310003L06RikQ9CV82 495 aa21.84■■□□□ 1.09
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms