RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 ZNF730Q6ZMV8 503 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 RAB43Q86YS6 212 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 CHPFQ8IZ52 775 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 TRUB1Q8WWH5 349 aaKnown RBP8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 TMCO6Q96DC7 493 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 CXorf40BQ96DE9 158 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 SLC35G5Q96KT7 338 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 SLC7A5P2Q9GIP4 190 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 CALML5Q9NZT1 146 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 ZNF624Q9P2J8 865 aaPredicted RBP8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 MAN2B2Q9Y2E5 1009 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 ACTL7AQ9Y615 435 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 FOCADQ5VW36 1801 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 CACNB4O00305 520 aaPredicted RBP8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 SAP18O00422 153 aaKnown RBP8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 OR1F1O43749 312 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 GSRP00390 522 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 PRKAR1AP10644 381 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 ARNTP27540 789 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 SCN1BQ07699 218 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 NFATC3Q12968 1075 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 GK3PQ14409 553 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 NDUFA5Q16718 116 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 AMZ2Q86W34 360 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 CNIH3Q8TBE1 160 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 NUS1Q96E22 293 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 A0A1B0GW55 424 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 TRBC2A0A5B9 178 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 TAF4O00268 1085 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 LEFTY2O00292 366 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 TNFRSF10BO14763 440 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 DUX4L2P0CJ85 424 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 DUX4L3P0CJ86 424 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 DUX4L4P0CJ87 422 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 DUX4L5P0CJ88 424 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 DUX4L6P0CJ89 424 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 DUX4L7P0CJ90 424 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 GJA1P17302 382 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 IDSP22304 550 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 CASP9P55211 416 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 FBXW4P57775 412 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 PRR5P85299 388 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 C18orf21Q32NC0 220 aaPredicted RBP8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 ZNF404Q494X3 552 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 MACC1Q6ZN28 852 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 Q6ZVL8 140 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 NUDT13Q86X67 352 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 CBARPQ8N350 705 aaPredicted RBP8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 RHBDF1Q96CC6 855 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 RTP3Q9BQQ7 232 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 BOCQ9BWV1 1114 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 NPLQ9BXD5 320 aaPredicted RBP8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 OSER1Q9NX31 292 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 DUX4Q9UBX2 424 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 ABHD14A-ACY1A0A1B0GW23 586 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 PSMD11O00231 422 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 SLC1A7O00341 560 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 ATP6V1G1O75348 118 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 SLC10A3P09131 477 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 SLC6A4P31645 630 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 RPS13P62277 151 aaKnown RBP8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 SF1Q15637 639 aaKnown RBP8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 ZNHIT3Q15649 155 aaPredicted RBP8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 KLHL35Q6PF15 583 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 PROKR1Q8TCW9 393 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 PDLIM5Q96HC4 596 aaKnown RBP8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 DIRAS2Q96HU8 199 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 BRINP2Q9C0B6 783 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 ZNF221Q9UK13 617 aa8.33□□□□□ -1.08
HNRNPU-219ENST00000639628 CCDC85CA6NKD9 419 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 K7ERQ8 282 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 TLL1O43897 1013 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 KLK1P06870 262 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 EPHX1P07099 455 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 CD247P20963 164 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 SDC2P34741 201 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 PSMD8P48556 350 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 CRISP3P54108 245 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 RBBP4Q09028 425 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 TARDBPQ13148 414 aaKnown RBP eCLIP8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 COLEC12Q5KU26 742 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 MANEALQ5VSG8 457 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 PLET1Q6UQ28 207 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 USP30Q70CQ3 517 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 OR5AK3PQ8NH89 298 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 NFKBIDQ8NI38 313 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 RFKQ969G6 155 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 POLR2J2Q9GZM3 115 aaKnown RBP8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 SPRTNQ9H040 489 aaPredicted RBP8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 KATNBL1Q9H079 304 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 RHBGQ9H310 441 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 GORASP2Q9H8Y8 452 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 VAPAQ9P0L0 249 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 RNF6Q9Y252 685 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 PCDHB11Q9Y5F2 797 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 NUMBLQ9Y6R0 609 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 H3BMQ9 156 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 GNAO1P09471 354 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 PRG2P13727 222 aa8.32□□□□□ -1.08
HNRNPU-219ENST00000639628 MYL9P24844 172 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms