RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 GRID2O43424 1007 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 LATO43561 262 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 HOXB2P14652 356 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 ABRAXAS2Q15018 415 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 ARMCX6Q7L4S7 300 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 ERMP1Q7Z2K6 904 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 SMPDL3AQ92484 453 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 RIPOR3Q96MK2 946 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 LINC00597Q9H2U6 94 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 ATXN10Q9UBB4 475 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 MYH9P35579 1960 aaKnown RBP13.79□□□□□ -0.2
GABRB3-219ENST00000636466 A0A1B0GW55 424 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 KRT33AO76009 404 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 DUX4L2P0CJ85 424 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 DUX4L3P0CJ86 424 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 DUX4L4P0CJ87 422 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 DUX4L5P0CJ88 424 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 DUX4L6P0CJ89 424 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 DUX4L7P0CJ90 424 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 CWF19L1Q69YN2 538 aaKnown RBP13.79□□□□□ -0.2
GABRB3-219ENST00000636466 ISCA2Q86U28 154 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 NRSN1Q8IZ57 195 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 POP5Q969H6 163 aaKnown RBP13.79□□□□□ -0.2
GABRB3-219ENST00000636466 NARS2Q96I59 477 aaKnown RBP13.79□□□□□ -0.2
GABRB3-219ENST00000636466 GPATCH1Q9BRR8 931 aaKnown RBP13.79□□□□□ -0.2
GABRB3-219ENST00000636466 IFT27Q9BW83 186 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 RBCK1Q9BYM8 510 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 DUX4Q9UBX2 424 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 UTS2RQ9UKP6 389 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 RIMKLBQ9ULI2 386 aa13.79□□□□□ -0.2
GABRB3-219ENST00000636466 ADAM12O43184 909 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 SMAD6O43541 496 aaKnown RBP13.78□□□□□ -0.2
GABRB3-219ENST00000636466 GJB3O75712 270 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 MPIP34949 423 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 SLC30A6Q6NXT4 461 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 FRRS1Q6ZNA5 592 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 CHST14Q8NCH0 376 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 STON2Q8WXE9 905 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 HSH2DQ96JZ2 352 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 KAT8Q9H7Z6 458 aaKnown RBP13.78□□□□□ -0.2
GABRB3-219ENST00000636466 DNAJC13O75165 2243 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 CACNA1CQ13936 2221 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 SLX4Q8IY92 1834 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 H3BSH0 61 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 SNAP29O95721 258 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 CLK3P49761 638 aaKnown RBP13.78□□□□□ -0.2
GABRB3-219ENST00000636466 PSMD7P51665 324 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 PIGFQ07326 219 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 PM20D1Q6GTS8 502 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 SLC15A3Q8IY34 581 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 GRHL3Q8TE85 626 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 KXD1Q9BQD3 176 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 CLEC4MQ9H2X3 399 aaPredicted RBP13.78□□□□□ -0.2
GABRB3-219ENST00000636466 A0A1W2PP55 124 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 A8MU76 341 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 B3GALT2O43825 422 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 KLHL18O94889 574 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 APLP1P51693 650 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 PPP2R2BQ00005 443 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 DUOXA1Q1HG43 343 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 IER5LQ5T953 404 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 ARMC3Q5W041 872 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 PAQR9Q6ZVX9 377 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 PIANPQ8IYJ0 282 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 MOSPD2Q8NHP6 518 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 PIGKQ92643 395 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 GFM1Q96RP9 751 aaKnown RBP13.78□□□□□ -0.2
GABRB3-219ENST00000636466 SPATA7Q9P0W8 599 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 COMMD3Q9UBI1 195 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 RIIAD1A6NNX1 92 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 STX16O14662 325 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 XPNPEP2O43895 674 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 B4GALT2O60909 372 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 ZNF30P17039 623 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 C5orf22Q49AR2 442 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 NOXRED1Q6NXP6 359 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 PDSS2Q86YH6 399 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 RGMAQ96B86 450 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 OMA1Q96E52 524 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 TRNT1Q96Q11 434 aaKnown RBP13.78□□□□□ -0.2
GABRB3-219ENST00000636466 DPH2Q9BQC3 489 aaPredicted RBP13.78□□□□□ -0.2
GABRB3-219ENST00000636466 PCBD2Q9H0N5 130 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 MAGEE1Q9HCI5 957 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 SCN9AQ15858 1988 aa13.78□□□□□ -0.2
GABRB3-219ENST00000636466 PKD1L3Q7Z443 1732 aa13.77□□□□□ -0.2
GABRB3-219ENST00000636466 A0A1W2PPW3 197 aa13.77□□□□□ -0.2
GABRB3-219ENST00000636466 SLC30A4O14863 429 aa13.77□□□□□ -0.2
GABRB3-219ENST00000636466 BCKDHAP12694 445 aa13.77□□□□□ -0.2
GABRB3-219ENST00000636466 CCT3P49368 545 aaKnown RBP13.77□□□□□ -0.2
GABRB3-219ENST00000636466 VEGFBP49765 207 aa13.77□□□□□ -0.2
GABRB3-219ENST00000636466 IST1P53990 364 aa13.77□□□□□ -0.2
GABRB3-219ENST00000636466 PNLIPRP1P54315 467 aa13.77□□□□□ -0.2
GABRB3-219ENST00000636466 DNAJB13P59910 316 aa13.77□□□□□ -0.2
GABRB3-219ENST00000636466 NDUFA9Q16795 377 aa13.77□□□□□ -0.2
GABRB3-219ENST00000636466 TMPRSS11AQ6ZMR5 421 aa13.77□□□□□ -0.2
GABRB3-219ENST00000636466 RNF130Q86XS8 419 aa13.77□□□□□ -0.2
GABRB3-219ENST00000636466 TOR3AQ9H497 397 aa13.77□□□□□ -0.2
GABRB3-219ENST00000636466 GIN1Q9NXP7 522 aa13.77□□□□□ -0.2
GABRB3-219ENST00000636466 EDDM13A0A1B0GTR0 161 aa13.77□□□□□ -0.21
GABRB3-219ENST00000636466 OMPP47874 163 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms