RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 WHRNQ9P202 907 aa17.52■□□□□ 0.4
CLN6-214ENST00000636314 VWA7Q9Y334 891 aa17.52■□□□□ 0.4
CLN6-214ENST00000636314 PCDHGB7Q9Y5F8 929 aa17.52■□□□□ 0.4
CLN6-214ENST00000636314 PSAT1Q9Y617 370 aa17.52■□□□□ 0.4
CLN6-214ENST00000636314 CELSR2Q9HCU4 2923 aa17.52■□□□□ 0.4
CLN6-214ENST00000636314 MED26O95402 600 aa17.51■□□□□ 0.39
CLN6-214ENST00000636314 TSPAN12O95859 305 aa17.51■□□□□ 0.39
CLN6-214ENST00000636314 COL8A1P27658 744 aa17.51■□□□□ 0.39
CLN6-214ENST00000636314 PGGT1BP53609 377 aa17.51■□□□□ 0.39
CLN6-214ENST00000636314 EMP3P54852 163 aa17.51■□□□□ 0.39
CLN6-214ENST00000636314 PHKG1Q16816 387 aa17.51■□□□□ 0.39
CLN6-214ENST00000636314 DCAF10Q5QP82 559 aa17.51■□□□□ 0.39
CLN6-214ENST00000636314 AGTRAPQ6RW13 159 aa17.51■□□□□ 0.39
CLN6-214ENST00000636314 STRA8Q7Z7C7 330 aa17.51■□□□□ 0.39
CLN6-214ENST00000636314 SLC26A11Q86WA9 606 aa17.51■□□□□ 0.39
CLN6-214ENST00000636314 TMEM151BQ8IW70 566 aa17.51■□□□□ 0.39
CLN6-214ENST00000636314 Q8NA96 180 aa17.51■□□□□ 0.39
CLN6-214ENST00000636314 PYROXD1Q8WU10 500 aa17.51■□□□□ 0.39
CLN6-214ENST00000636314 ALKBH8Q96BT7 664 aaKnown RBP17.51■□□□□ 0.39
CLN6-214ENST00000636314 OR2A5Q96R48 311 aa17.51■□□□□ 0.39
CLN6-214ENST00000636314 NUDT9Q9BW91 350 aa17.51■□□□□ 0.39
CLN6-214ENST00000636314 TRIM54Q9BYV2 358 aa17.51■□□□□ 0.39
CLN6-214ENST00000636314 ATG10Q9H0Y0 220 aa17.51■□□□□ 0.39
CLN6-214ENST00000636314 SOX17Q9H6I2 414 aaPredicted RBP17.51■□□□□ 0.39
CLN6-214ENST00000636314 SYNPO2LQ9H987 977 aa17.51■□□□□ 0.39
CLN6-214ENST00000636314 NSMCE4AQ9NXX6 385 aa17.51■□□□□ 0.39
CLN6-214ENST00000636314 CDC23Q9UJX2 597 aa17.51■□□□□ 0.39
CLN6-214ENST00000636314 RUVBL1Q9Y265 456 aaKnown RBP17.51■□□□□ 0.39
CLN6-214ENST00000636314 FAM95CA0A1B0GW59 222 aa17.5■□□□□ 0.39
CLN6-214ENST00000636314 H7BY64 318 aa17.5■□□□□ 0.39
CLN6-214ENST00000636314 TXNDC9O14530 226 aa17.5■□□□□ 0.39
CLN6-214ENST00000636314 PRPF4O43172 522 aaKnown RBP eCLIP17.5■□□□□ 0.392e-7■■■■■ 31.7
CLN6-214ENST00000636314 SAT1P21673 171 aa17.5■□□□□ 0.39
CLN6-214ENST00000636314 FBLP22087 321 aaKnown RBP17.5■□□□□ 0.39
CLN6-214ENST00000636314 MMP11P24347 488 aa17.5■□□□□ 0.39
CLN6-214ENST00000636314 CCND1P24385 295 aa17.5■□□□□ 0.39
CLN6-214ENST00000636314 HRH2P25021 359 aa17.5■□□□□ 0.39
CLN6-214ENST00000636314 RELAQ04206 551 aa17.5■□□□□ 0.39
CLN6-214ENST00000636314 NAE1Q13564 534 aa17.5■□□□□ 0.39
CLN6-214ENST00000636314 HKDC1Q2TB90 917 aa17.5■□□□□ 0.39
CLN6-214ENST00000636314 SLC6A19Q695T7 634 aa17.5■□□□□ 0.39
CLN6-214ENST00000636314 SHISA6Q6ZSJ9 500 aa17.5■□□□□ 0.39
CLN6-214ENST00000636314 MAMDC2Q7Z304 686 aaPredicted RBP17.5■□□□□ 0.39
CLN6-214ENST00000636314 ZC3HC1Q86WB0 502 aaKnown RBP17.5■□□□□ 0.39
CLN6-214ENST00000636314 C17orf64Q86WR6 236 aa17.5■□□□□ 0.39
CLN6-214ENST00000636314 PLD3Q8IV08 490 aa17.5■□□□□ 0.39
CLN6-214ENST00000636314 NACC2Q96BF6 587 aa17.5■□□□□ 0.39
CLN6-214ENST00000636314 MVB12AQ96EY5 273 aa17.5■□□□□ 0.39
CLN6-214ENST00000636314 PRAP1Q96NZ9 151 aa17.5■□□□□ 0.39
CLN6-214ENST00000636314 SAYSD1Q9NPB0 183 aa17.5■□□□□ 0.39
CLN6-214ENST00000636314 TMEM184CQ9NVA4 438 aa17.5■□□□□ 0.39
CLN6-214ENST00000636314 ARL15Q9NXU5 204 aa17.5■□□□□ 0.39
CLN6-214ENST00000636314 MOCS1Q9NZB8 636 aa17.5■□□□□ 0.39
CLN6-214ENST00000636314 ZNF282Q9UDV7 671 aaPredicted RBP17.5■□□□□ 0.39
CLN6-214ENST00000636314 CDC14AQ9UNH5 594 aa17.5■□□□□ 0.39
CLN6-214ENST00000636314 UTP11Q9Y3A2 253 aaKnown RBP17.5■□□□□ 0.39
CLN6-214ENST00000636314 AGPSO00116 658 aa17.49■□□□□ 0.39
CLN6-214ENST00000636314 EIF3HO15372 352 aaKnown RBP eCLIP17.49■□□□□ 0.39
CLN6-214ENST00000636314 ZNF37AP17032 561 aaPredicted RBP17.49■□□□□ 0.39
CLN6-214ENST00000636314 AP1S2P56377 157 aa17.49■□□□□ 0.39
CLN6-214ENST00000636314 OCA2Q04671 838 aa17.49■□□□□ 0.39
CLN6-214ENST00000636314 CBLBQ13191 982 aa17.49■□□□□ 0.39
CLN6-214ENST00000636314 RAPSNQ13702 412 aa17.49■□□□□ 0.39
CLN6-214ENST00000636314 RBBP7Q16576 425 aa17.49■□□□□ 0.39
CLN6-214ENST00000636314 GARNL3Q5VVW2 1013 aa17.49■□□□□ 0.39
CLN6-214ENST00000636314 CRB3Q9BUF7 120 aa17.49■□□□□ 0.39
CLN6-214ENST00000636314 RAB17Q9H0T7 212 aa17.49■□□□□ 0.39
CLN6-214ENST00000636314 GRHL1Q9NZI5 618 aa17.49■□□□□ 0.39
CLN6-214ENST00000636314 VSTM2BA6NLU5 285 aa17.48■□□□□ 0.39
CLN6-214ENST00000636314 P2RX6O15547 441 aa17.48■□□□□ 0.39
CLN6-214ENST00000636314 ANXA5P08758 320 aa17.48■□□□□ 0.39
CLN6-214ENST00000636314 ENO2P09104 434 aaPredicted RBP17.48■□□□□ 0.39
CLN6-214ENST00000636314 VARSP26640 1264 aaKnown RBP17.48■□□□□ 0.39
CLN6-214ENST00000636314 RPS15AP62244 130 aaKnown RBP17.48■□□□□ 0.39
CLN6-214ENST00000636314 DSG2Q14126 1118 aa17.48■□□□□ 0.39
CLN6-214ENST00000636314 VWA5B1Q5TIE3 1220 aa17.48■□□□□ 0.39
CLN6-214ENST00000636314 DUPD1Q68J44 220 aa17.48■□□□□ 0.39
CLN6-214ENST00000636314 CAPN13Q6MZZ7 669 aaPredicted RBP17.48■□□□□ 0.39
CLN6-214ENST00000636314 LCTLQ6UWM7 567 aa17.48■□□□□ 0.39
CLN6-214ENST00000636314 HPS6Q86YV9 775 aa17.48■□□□□ 0.39
CLN6-214ENST00000636314 PRSS58Q8IYP2 241 aa17.48■□□□□ 0.39
CLN6-214ENST00000636314 GALNT16Q8N428 558 aa17.48■□□□□ 0.39
CLN6-214ENST00000636314 RBMXL3Q8N7X1 1067 aaKnown RBP17.48■□□□□ 0.39
CLN6-214ENST00000636314 STT3BQ8TCJ2 826 aa17.48■□□□□ 0.39
CLN6-214ENST00000636314 CDKL2Q92772 493 aa17.48■□□□□ 0.39
CLN6-214ENST00000636314 PNPLA2Q96AD5 504 aa17.48■□□□□ 0.39
CLN6-214ENST00000636314 MIEF2Q96C03 454 aa17.48■□□□□ 0.39
CLN6-214ENST00000636314 VPS50Q96JG6 964 aa17.48■□□□□ 0.39
CLN6-214ENST00000636314 HAUS8Q9BT25 410 aa17.48■□□□□ 0.39
CLN6-214ENST00000636314 SGPP1Q9BX95 441 aa17.48■□□□□ 0.39
CLN6-214ENST00000636314 DRC3Q9H069 523 aa17.48■□□□□ 0.39
CLN6-214ENST00000636314 RHOJQ9H4E5 214 aa17.48■□□□□ 0.39
CLN6-214ENST00000636314 SEMA3GQ9NS98 782 aa17.48■□□□□ 0.39
CLN6-214ENST00000636314 FBXL4Q9UKA2 621 aa17.48■□□□□ 0.39
CLN6-214ENST00000636314 SH2B3Q9UQQ2 575 aa17.48■□□□□ 0.39
CLN6-214ENST00000636314 CLDN1O95832 211 aa17.47■□□□□ 0.39
CLN6-214ENST00000636314 ALPPP05187 535 aa17.47■□□□□ 0.39
CLN6-214ENST00000636314 CDH1P12830 882 aa17.47■□□□□ 0.39
CLN6-214ENST00000636314 SSTR1P30872 391 aa17.47■□□□□ 0.39
CLN6-214ENST00000636314 DCTP40126 519 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms