RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 FBRSQ9HAH7 460 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 PSMD9O00233 223 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 ST3GAL4Q11206 333 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 CHAC2Q8WUX2 184 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 CDK15Q96Q40 435 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 PARPBPQ9NWS1 579 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 HMGN1P05114 100 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 TYMPP19971 482 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 HOXD10P28358 340 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 MC3RP41968 323 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 SCARB2Q14108 478 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 ZNF527Q8NB42 609 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 GPRC5AQ8NFJ5 357 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 TAAR1Q96RJ0 339 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 TPT1P13693 172 aaKnown RBP9.05□□□□□ -0.96
COL12A1-211ENST00000615798 CXCR2P25025 360 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 PKLRP30613 574 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 RENBPP51606 427 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 SLC6A3Q01959 620 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 ELAVL2Q12926 359 aaKnown RBP9.05□□□□□ -0.96
COL12A1-211ENST00000615798 SLC2A7Q6PXP3 512 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 BEND4Q6ZU67 534 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 EEPD1Q7L9B9 569 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 GPR156Q8NFN8 814 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 OR8D2Q9GZM6 311 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 XPNPEP3Q9NQH7 507 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 USP54Q70EL1 1684 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 TXNDC12O95881 172 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 CD97P48960 835 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 RAB31Q13636 194 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 GAREM2Q75VX8 874 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 TIPARPQ7Z3E1 657 aaKnown RBP9.05□□□□□ -0.96
COL12A1-211ENST00000615798 SNAPC3Q92966 411 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 AZIN2Q96A70 460 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 RASD2Q96D21 266 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 TGM7Q96PF1 710 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 CIB1Q99828 191 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 UBTD1Q9HAC8 227 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 PLA2G4CQ9UP65 541 aa9.05□□□□□ -0.96
COL12A1-211ENST00000615798 SEC14L6B5MCN3 397 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 ITGB6P18564 788 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 PTPN9P43378 593 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 THBS3P49746 956 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 NDUFA6P56556 154 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 IL17AQ16552 155 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 PRSS55Q6UWB4 352 aaPredicted RBP9.04□□□□□ -0.96
COL12A1-211ENST00000615798 GSG1LQ6UXU4 331 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 VSIG10LQ86VR7 867 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 FAM217AQ8IXS0 508 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 FAM185AQ8N0U4 392 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 CYP4X1Q8N118 509 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 WDCPQ9H6R7 721 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 PCDHGA2Q9Y5H1 932 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 SPIN1Q9Y657 262 aaPredicted RBP9.04□□□□□ -0.96
COL12A1-211ENST00000615798 HMX3A6NHT5 357 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 KDELR1P24390 212 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 PAN2Q504Q3 1202 aaKnown RBP9.04□□□□□ -0.96
COL12A1-211ENST00000615798 IQCHQ86VS3 1027 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 BAGE3Q86Y29 109 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 BAGE2Q86Y30 109 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 NPLOC4Q8TAT6 608 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 DEFB129Q9H1M3 183 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 COL1A2P08123 1366 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 A0A0A0MRY4 1105 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 EDF1O60869 148 aaKnown RBP9.04□□□□□ -0.96
COL12A1-211ENST00000615798 COL6A2P12110 1019 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 BPIP17213 487 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 TPMTP51580 245 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 RNF212Q495C1 297 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 C3P1Q6ZMU1 363 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 PACRGLQ8N7B6 248 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 RIT1Q92963 219 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 HS6ST2Q96MM7 605 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 SPATA13Q96N96 652 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 OR52E6Q96RD3 313 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 MINDY3Q9H8M7 445 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 ATP13A1Q9HD20 1204 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 OR2S2Q9NQN1 319 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 CCDC88AQ3V6T2 1871 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 MLLT1Q03111 559 aaPredicted RBP9.04□□□□□ -0.96
COL12A1-211ENST00000615798 GPRIN3Q6ZVF9 776 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 ATG4CQ96DT6 458 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 PCDHB18PQ96TA0 734 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 CDC6Q99741 560 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 TMEM39BQ9GZU3 492 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 RNF6Q9Y252 685 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 TNFSF13BQ9Y275 285 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 USP20Q9Y2K6 914 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 LRRC42Q9Y546 428 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 LRP6O75581 1613 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 EGFRP00533 1210 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 KLRK1P26718 216 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 CCND3P30281 292 aaPredicted RBP9.04□□□□□ -0.96
COL12A1-211ENST00000615798 GRIA4P48058 902 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 ANKRD22Q5VYY1 191 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 PLEKHG7Q6ZR37 379 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 RAB39BQ96DA2 213 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 MTFR1LQ9H019 292 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 NANSQ9NR45 359 aa9.04□□□□□ -0.96
COL12A1-211ENST00000615798 CKAP5Q14008 2032 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms