RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 TBC1D13Q9NVG8 400 aa6.51□□□□□ -1.37
CDKAL1-204ENST00000613575 RBM22Q9NW64 420 aaKnown RBP eCLIP6.51□□□□□ -1.37
CDKAL1-204ENST00000613575 THUMPD1Q9NXG2 353 aaKnown RBP6.51□□□□□ -1.37
CDKAL1-204ENST00000613575 CD274Q9NZQ7 290 aa6.51□□□□□ -1.37
CDKAL1-204ENST00000613575 GAB2Q9UQC2 676 aa6.51□□□□□ -1.37
CDKAL1-204ENST00000613575 RUVBL2Q9Y230 463 aaKnown RBP6.51□□□□□ -1.37
CDKAL1-204ENST00000613575 TLR6Q9Y2C9 796 aa6.51□□□□□ -1.37
CDKAL1-204ENST00000613575 TCAF1Q9Y4C2 921 aa6.51□□□□□ -1.37
CDKAL1-204ENST00000613575 SLC22A7Q9Y694 548 aa6.51□□□□□ -1.37
CDKAL1-204ENST00000613575 PDCD11Q14690 1871 aaKnown RBP6.51□□□□□ -1.37
CDKAL1-204ENST00000613575 A8MUA0 341 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 AP3D1O14617 1153 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 GRID2O43424 1007 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 CA12O43570 354 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 PIP5K1CO60331 668 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 NPHS1O60500 1241 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 WISP3O95389 354 aaPredicted RBP6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 MT-CYBP00156 380 aaPredicted RBP6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 PGK1P00558 417 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 EPOP01588 193 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 RBP1P09455 135 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 MBL2P11226 248 aaPredicted RBP6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 CKMT2P17540 419 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 CD40LGP29965 261 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 THPOP40225 353 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 PGFP49763 221 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 SLC7A2P52569 658 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 RAD23AP54725 363 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 FCGRTP55899 365 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 DEFA1P59665 94 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 DEFA3P59666 94 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 RAB10P61026 200 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 IRF9Q00978 393 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 YWHAHQ04917 246 aaPredicted RBP6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 USP10Q14694 798 aaKnown RBP6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 KCNA10Q16322 511 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 HSD17B12Q53GQ0 312 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 ARL13AQ5H913 290 aaPredicted RBP6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 CDKL4Q5MAI5 379 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 ELP2Q6IA86 826 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 MZT2BQ6NZ67 158 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 ZNF574Q6ZN55 896 aaPredicted RBP6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 LIX1LQ8IVB5 337 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 MFSD6LQ8IWD5 586 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 CENPLQ8N0S6 344 aaPredicted RBP6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 FSTL5Q8N475 847 aaPredicted RBP6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 ATPAF2Q8N5M1 289 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 ZNF781Q8N8C0 355 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 TDRD5Q8NAT2 981 aaKnown RBP6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 KDM1BQ8NB78 822 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 SPATA22Q8NHS9 363 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 RP9Q8TA86 221 aaKnown RBP6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 ZFAND1Q8TCF1 268 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 MAPK15Q8TD08 544 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 RFKQ969G6 155 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 NXPE2Q96DL1 559 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 C19orf60Q96EN9 201 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 IMP4Q96G21 291 aaKnown RBP6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 PPP1R36Q96LQ0 422 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 PGLYRP2Q96PD5 576 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 GDF15Q99988 308 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 MRPL57Q9BQC6 102 aaKnown RBP6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 APOL2Q9BQE5 337 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 COPS4Q9BT78 406 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 NPLQ9BXD5 320 aaPredicted RBP6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 SIK2Q9H0K1 926 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 FBXO44Q9H4M3 255 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 BIN3Q9NQY0 253 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 FBXO8Q9NRD0 319 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 GSN-AS1Q9NRJ2 163 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 UBP1Q9NZI7 540 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 COQ3Q9NZJ6 369 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 VSX1Q9NZR4 365 aaPredicted RBP6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 UXTQ9UBK9 157 aaPredicted RBP6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 SLC39A10Q9ULF5 831 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 HS3ST4Q9Y661 456 aa6.5□□□□□ -1.37
CDKAL1-204ENST00000613575 A0A087X1B8 175 aa6.49□□□□□ -1.37
CDKAL1-204ENST00000613575 LOC285095A0A1B0GVY8 99 aa6.49□□□□□ -1.37
CDKAL1-204ENST00000613575 MROH6A6NGR9 719 aa6.49□□□□□ -1.37
CDKAL1-204ENST00000613575 FAM155AB1AL88 458 aaPredicted RBP6.49□□□□□ -1.37
CDKAL1-204ENST00000613575 HSBP1L1C9JCN9 74 aa6.49□□□□□ -1.37
CDKAL1-204ENST00000613575 E9PAM4 449 aa6.49□□□□□ -1.37
CDKAL1-204ENST00000613575 ABCD4O14678 606 aa6.49□□□□□ -1.37
CDKAL1-204ENST00000613575 SGCEO43556 437 aa6.49□□□□□ -1.37
CDKAL1-204ENST00000613575 DLX3O60479 287 aa6.49□□□□□ -1.37
CDKAL1-204ENST00000613575 VAPBO95292 243 aa6.49□□□□□ -1.37
CDKAL1-204ENST00000613575 HSPA4LO95757 839 aa6.49□□□□□ -1.37
CDKAL1-204ENST00000613575 S100A8P05109 93 aa6.49□□□□□ -1.37
CDKAL1-204ENST00000613575 HLA-DQB2P05538 268 aa6.49□□□□□ -1.37
CDKAL1-204ENST00000613575 CD63P08962 238 aa6.49□□□□□ -1.37
CDKAL1-204ENST00000613575 COX4I1P13073 169 aa6.49□□□□□ -1.37
CDKAL1-204ENST00000613575 PAMP19021 973 aa6.49□□□□□ -1.37
CDKAL1-204ENST00000613575 CYP2A7P20853 494 aa6.49□□□□□ -1.37
CDKAL1-204ENST00000613575 GDI1P31150 447 aa6.49□□□□□ -1.37
CDKAL1-204ENST00000613575 MAN2A2P49641 1150 aa6.49□□□□□ -1.37
CDKAL1-204ENST00000613575 WNT3AP56704 352 aa6.49□□□□□ -1.37
CDKAL1-204ENST00000613575 CARD18P57730 90 aa6.49□□□□□ -1.37
CDKAL1-204ENST00000613575 ERVFC1P60507 584 aa6.49□□□□□ -1.37
CDKAL1-204ENST00000613575 HNRNPKP61978 463 aaKnown RBP eCLIP6.49□□□□□ -1.37
CDKAL1-204ENST00000613575 SLC25A3Q00325 362 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms