RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 IRF8Q02556 426 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 DSC1Q08554 894 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 LRRC74AQ0VAA2 488 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 XKR6Q5GH73 641 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 ADGRF1Q5T601 910 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 TXNDC8Q6A555 127 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 TCAIMQ8N3R3 496 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 ARL14EPQ8N8R7 260 aaPredicted RBP19.76■□□□□ 0.75
SSBP3-216ENST00000610401 VANGL1Q8TAA9 524 aaPredicted RBP19.76■□□□□ 0.75
SSBP3-216ENST00000610401 SCAMP4Q969E2 229 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 NIPSNAP1Q9BPW8 284 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 ITPAQ9BY32 194 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 ANKRD36A6QL64 1941 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 FNDC1Q4ZHG4 1894 aaPredicted RBP19.75■□□□□ 0.75
SSBP3-216ENST00000610401 ZNF840PA6NDX5 716 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 M0R082 166 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 KPNA5O15131 536 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 ASNA1O43681 348 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 TGFBR2P37173 567 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 SPIBQ01892 262 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 SYT6Q5T7P8 510 aaPredicted RBP19.75■□□□□ 0.75
SSBP3-216ENST00000610401 AGAP7PQ5VUJ5 663 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 CCBE1Q6UXH8 406 aaPredicted RBP19.75■□□□□ 0.75
SSBP3-216ENST00000610401 NAGSQ8N159 534 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 SMG9Q9H0W8 520 aaKnown RBP19.75■□□□□ 0.75
SSBP3-216ENST00000610401 TPT1P8Q9HAU6 139 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 CKMT1AP12532 417 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 FPR1P21462 350 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 ACRV1P26436 265 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 PTPN6P29350 595 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 EIF2DP41214 584 aaKnown RBP19.75■□□□□ 0.75
SSBP3-216ENST00000610401 CTSOP43234 321 aaPredicted RBP19.75■□□□□ 0.75
SSBP3-216ENST00000610401 GZMMP51124 257 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 ACOX1Q15067 660 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 PARP16Q8N5Y8 322 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 FBXO22Q8NEZ5 403 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 BCL7CQ8WUZ0 217 aaPredicted RBP19.75■□□□□ 0.75
SSBP3-216ENST00000610401 TRIM39Q9HCM9 518 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 IMPAD1Q9NX62 359 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 PCDHGA6Q9Y5G7 932 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 RING1Q06587 406 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 UGT8Q16880 541 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 RFX4Q33E94 735 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 ARMCX4Q5H9R4 360 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 BCDIN3DQ7Z5W3 292 aaKnown RBP19.75■□□□□ 0.75
SSBP3-216ENST00000610401 SVOPQ8N4V2 548 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 DBF4BQ8NFT6 615 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 PIH1D2Q8WWB5 315 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 NELL1Q92832 810 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 VMP1Q96GC9 406 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 OR5M11Q96RB7 305 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 PRRG3Q9BZD7 231 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 TP63Q9H3D4 680 aaPredicted RBP19.75■□□□□ 0.75
SSBP3-216ENST00000610401 TM9SF3Q9HD45 589 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 MAP4K5Q9Y4K4 846 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 PCDHB1Q9Y5F3 818 aa19.75■□□□□ 0.75
SSBP3-216ENST00000610401 TRBV5-3A0A0A0MS03 114 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 OR2A25A4D2G3 310 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 TBKBP1A7MCY6 615 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 UPK1BO75841 260 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 TRBC1P01850 177 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 ETFAP13804 333 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 RAB15P59190 212 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 ST3GAL4Q11206 333 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 CCSMST1Q4G0I0 132 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 GPRC6AQ5T6X5 926 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 SCAIQ8N9R8 606 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 SLC32A1Q9H598 525 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 EHD3Q9NZN3 535 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 ANKMY1Q9P2S6 941 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 SPEGQ15772 3267 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 TNFRSF11BO00300 401 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 CTSKP43235 329 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 MEF2AQ02078 507 aaPredicted RBP19.74■□□□□ 0.75
SSBP3-216ENST00000610401 GPR17Q13304 367 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 COX20Q5RI15 118 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 TRIM46Q7Z4K8 759 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 PTOV1Q86YD1 416 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 ZZZ3Q8IYH5 903 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 FATE1Q969F0 183 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 CEP19Q96LK0 163 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 ZIC5Q96T25 663 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 TCF25Q9BQ70 676 aa19.74■□□□□ 0.75
SSBP3-216ENST00000610401 CCDC88CQ9P219 2028 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 RFPL2O75678 378 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 CCNKO75909 580 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 SOX14O95416 240 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 CRHR2Q13324 411 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 CALHM3Q86XJ0 350 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 ZNF675Q8TD23 568 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 NDRG4Q9ULP0 352 aaKnown RBP19.73■□□□□ 0.75
SSBP3-216ENST00000610401 WWP2O00308 870 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 SUV39H1O43463 412 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 APOL3O95236 402 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 NKX3-2P78367 333 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 MC1RQ01726 317 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 CAPN13Q6MZZ7 669 aaPredicted RBP19.73■□□□□ 0.75
SSBP3-216ENST00000610401 NLRC5Q86WI3 1866 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 METTL4Q8N3J2 472 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 LRFN2Q9ULH4 789 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms