RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 KCNMB4Q86W47 210 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 DCUN1D3Q8IWE4 304 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 SULF2Q8IWU5 870 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 PIANPQ8IYJ0 282 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 BCORP1Q8N888 145 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 FAM71DQ8N9W8 422 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 MAGEC3Q8TD91 643 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 FAR1Q8WVX9 515 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 CNDP1Q96KN2 507 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 LMF1Q96S06 567 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 SELENOSQ9BQE4 189 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 RHOXF2Q9BQY4 288 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 TMEM121Q9BTD3 319 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 NAT9Q9BTE0 207 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 DDX47Q9H0S4 455 aaKnown RBP9.03□□□□□ -0.96
BRCA1-226ENST00000591534 PPCSQ9HAB8 311 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 SLC6A20Q9NP91 592 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 CUTCQ9NTM9 273 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 RIMKLBQ9ULI2 386 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 MAP2K7O14733 419 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 PCDH17O14917 1159 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 PFDN6O15212 129 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 PRPF4O43172 522 aaKnown RBP eCLIP9.02□□□□□ -0.975e-17■■■■■ 29.7
BRCA1-226ENST00000591534 LRRTM2O43300 516 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 USP1O94782 785 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 KRT14P02533 472 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 PRSS56P0CW18 603 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 ADRA1DP25100 572 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 PSMA3P25788 255 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 ARNTP27540 789 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 PRAMEP78395 509 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 SIX1Q15475 284 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-226ENST00000591534 OASLQ15646 514 aaKnown RBP9.02□□□□□ -0.97
BRCA1-226ENST00000591534 INAQ16352 499 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 NKG7Q16617 165 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 RPUSD3Q6P087 351 aaKnown RBP9.02□□□□□ -0.97
BRCA1-226ENST00000591534 MTFR2Q6P444 385 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 FIGLAQ6QHK4 219 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 BNC2Q6ZN30 1099 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-226ENST00000591534 DMRTC2Q8IXT2 367 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-226ENST00000591534 PPIL6Q8IXY8 311 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 SLC22A15Q8IZD6 547 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 OR6P1Q8NGX9 317 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 OR2L8Q8NGY9 312 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 OR4L1Q8NH43 312 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 FLVCR1-AS1Q8TAF5 88 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 C1orf54Q8WWF1 131 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 PEX13Q92968 403 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 RAD51AP1Q96B01 352 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 LRRC39Q96DD0 335 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 THOC3Q96J01 351 aaKnown RBP9.02□□□□□ -0.97
BRCA1-226ENST00000591534 FOPNLQ96NB1 174 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 PANX3Q96QZ0 392 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 RANBP9Q96S59 729 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 FMO2Q99518 471 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 CCDC77Q9BR77 488 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 LRRC1Q9BTT6 524 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 PARD6BQ9BYG5 372 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 OLAHQ9NV23 265 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 UTP6Q9NYH9 597 aaKnown RBP9.02□□□□□ -0.97
BRCA1-226ENST00000591534 CDC14AQ9UNH5 594 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 ENTPD4Q9Y227 616 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 OSGIN2Q9Y236 505 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 CREBBPQ92793 2442 aa9.02□□□□□ -0.97
BRCA1-226ENST00000591534 CCDC162PA2VCL2 907 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 FITM1A5D6W6 292 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 GOLGA6L10A6NI86 522 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 SOCS6O14544 535 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 RASGRF2O14827 1237 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 RAD51CO43502 376 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 HCRTR1O43613 425 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 HPP00738 406 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 IFNB1P01574 187 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 ERVK-10P10266 1014 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 CXCR2P25025 360 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 ELAVL4P26378 380 aaKnown RBP9.01□□□□□ -0.97
BRCA1-226ENST00000591534 FOXN2P32314 431 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 CCNFP41002 786 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 TTPAP49638 278 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 ARG2P78540 354 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 MFAP5Q13361 173 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 SNX1Q13596 522 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 ZRSR2Q15696 482 aaKnown RBP9.01□□□□□ -0.97
BRCA1-226ENST00000591534 DOPEY1Q5JWR5 2465 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 DUPD1Q68J44 220 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 PTRHD1Q6GMV3 140 aaKnown RBP9.01□□□□□ -0.97
BRCA1-226ENST00000591534 KIRREL2Q6UWL6 708 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 CENPUQ71F23 418 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 HDXQ7Z353 690 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 KBTBD2Q8IY47 623 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 PDIK1LQ8N165 341 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 NOA1Q8NC60 698 aaKnown RBP9.01□□□□□ -0.97
BRCA1-226ENST00000591534 CFAP61Q8NHU2 1237 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 FBXO27Q8NI29 283 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 SUN3Q8TAQ9 357 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 GRHL3Q8TE85 626 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 SKA2Q8WVK7 121 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-226ENST00000591534 HDAC10Q969S8 669 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 MIEF2Q96C03 454 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 NRTNQ99748 197 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms