RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 GSTM4Q03013 218 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 SPEM2Q0P670 501 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 GRSF1Q12849 480 aaKnown RBP eCLIP7.17□□□□□ -1.26
ZNF540-206ENST00000589117 RAB39AQ14964 217 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 XKR6Q5GH73 641 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 ANXA8L1Q5VT79 327 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 GPR107Q5VW38 600 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 ERAP2Q6P179 960 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 NEK5Q6P3R8 708 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 LILRA6Q6PI73 481 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 DOK6Q6PKX4 331 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 SPESP1Q6UW49 350 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 ENPP6Q6UWR7 440 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 NLRP8Q86W28 1048 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 TMEM25Q86YD3 366 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 THAP3Q8WTV1 239 aaPredicted RBP7.17□□□□□ -1.26
ZNF540-206ENST00000589117 RNF166Q96A37 237 aaPredicted RBP7.17□□□□□ -1.26
ZNF540-206ENST00000589117 C12orf43Q96C57 262 aaKnown RBP7.17□□□□□ -1.26
ZNF540-206ENST00000589117 LMLNQ96KR4 655 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 APOLD1Q96LR9 279 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 P2RY13Q9BPV8 354 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 CPPED1Q9BRF8 314 aaPredicted RBP7.17□□□□□ -1.26
ZNF540-206ENST00000589117 ABCG8Q9H221 673 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 SPHK2Q9NRA0 654 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 AASDHPPTQ9NRN7 309 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 SAGE1Q9NXZ1 904 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 SLCO3A1Q9UIG8 710 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 CDH7Q9ULB5 785 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 PCDHB10Q9UN67 800 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 ANAPC1Q9H1A4 1944 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 ANKRD12Q6UB98 2062 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 LOC100130705A0A1B0GUX0 176 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 MAGEB17A8MXT2 336 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 CLIC1O00299 241 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 FPGTO14772 594 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 ATXN7O15265 892 aaPredicted RBP7.16□□□□□ -1.26
ZNF540-206ENST00000589117 HS6ST1O60243 411 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 C1SP09871 688 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 COX7A2P14406 83 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 TYRP14679 529 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 SDC1P18827 310 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 SOX18P35713 384 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 NEK2P51955 445 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 ST8SIA6P61647 398 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 WDR5P61964 334 aaKnown RBP7.16□□□□□ -1.26
ZNF540-206ENST00000589117 PPP2R2BQ00005 443 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 SEMG2Q02383 582 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 TNP2Q05952 138 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 PMS2P3Q13401 168 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 AAK1Q2M2I8 961 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 DHRS4L2Q6PKH6 230 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 ZNF621Q6ZSS3 439 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 TMEM26Q6ZUK4 368 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 ZDHHC21Q8IVQ6 265 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 DDHD1Q8NEL9 900 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 PJA1Q8NG27 643 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 OR8J2Q8NGG1 315 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 OR2A12Q8NGT7 310 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 MIPOL1Q8TD10 442 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 RAB2BQ8WUD1 216 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 TBC1D20Q96BZ9 403 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 PYCR2Q96C36 320 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 DOK1Q99704 481 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 RC3H2Q9HBD1 1191 aaKnown RBP7.16□□□□□ -1.26
ZNF540-206ENST00000589117 C11orf16Q9NQ32 467 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 NFKBIL1Q9UBC1 381 aaPredicted RBP7.16□□□□□ -1.26
ZNF540-206ENST00000589117 DLGAP4Q9Y2H0 992 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 DYRK1BQ9Y463 629 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 KCNE2Q9Y6J6 123 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 MICAL3Q7RTP6 2002 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 KCNE1BA0A087WTH5 132 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 MGAT4DA6NG13 374 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 H0YIV9 168 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 CCL16O15467 120 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 FKBP9O95302 570 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 CPNE6O95741 557 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 ZNF682O95780 498 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 GJA1P17302 382 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 EPORP19235 508 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 CCNA2P20248 432 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 CRHBPP24387 322 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 GSTM2P28161 218 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 RYKP34925 604 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 HPCAL1P37235 193 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 DEFB103AP81534 67 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 HPCAP84074 193 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 PLAURQ03405 335 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 MTAPQ13126 283 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 NEDD8Q15843 81 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 PYCR3Q53H96 274 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 SPIN4Q56A73 249 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 ZNF805Q5CZA5 627 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 C6orf141Q5SZD1 244 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 ZCCHC8Q6NZY4 707 aaKnown RBP7.16□□□□□ -1.26
ZNF540-206ENST00000589117 SHQ1Q6PI26 577 aaKnown RBP7.16□□□□□ -1.26
ZNF540-206ENST00000589117 THOC6Q86W42 341 aaKnown RBP7.16□□□□□ -1.26
ZNF540-206ENST00000589117 HORMAD1Q86X24 394 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 MSRB3Q8IXL7 192 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 PHACTR4Q8IZ21 702 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 NRSN1Q8IZ57 195 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms