RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 ATP6V0D1P61421 351 aa13.31□□□□□ -0.28
GGA3-203ENST00000577435 NKG7Q16617 165 aa13.31□□□□□ -0.28
GGA3-203ENST00000577435 TCTN3Q6NUS6 607 aa13.31□□□□□ -0.28
GGA3-203ENST00000577435 MED25Q71SY5 747 aa13.31□□□□□ -0.28
GGA3-203ENST00000577435 VN1R4Q7Z5H5 301 aa13.31□□□□□ -0.28
GGA3-203ENST00000577435 KLHDC8AQ8IYD2 350 aa13.31□□□□□ -0.28
GGA3-203ENST00000577435 PYCR2Q96C36 320 aa13.31□□□□□ -0.28
GGA3-203ENST00000577435 OR4K3Q96R72 315 aa13.31□□□□□ -0.28
GGA3-203ENST00000577435 CYTH2Q99418 400 aa13.31□□□□□ -0.28
GGA3-203ENST00000577435 CAB39LQ9H9S4 337 aa13.31□□□□□ -0.28
GGA3-203ENST00000577435 ZNF304Q9HCX3 659 aa13.31□□□□□ -0.28
GGA3-203ENST00000577435 NINJ2Q9NZG7 142 aa13.31□□□□□ -0.28
GGA3-203ENST00000577435 TLK1Q9UKI8 766 aa13.31□□□□□ -0.28
GGA3-203ENST00000577435 NXT1Q9UKK6 140 aaKnown RBP13.31□□□□□ -0.28
GGA3-203ENST00000577435 DOCK10Q96BY6 2186 aa13.31□□□□□ -0.28
GGA3-203ENST00000577435 NPEPPSL1A6NEC2 478 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 MKRN2OSH3BPM6 223 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 PHGDHO43175 533 aaKnown RBP13.3□□□□□ -0.28
GGA3-203ENST00000577435 LCMT2O60294 686 aaKnown RBP13.3□□□□□ -0.28
GGA3-203ENST00000577435 FAM155BO75949 473 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 IGHEP01854 428 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 UMODP07911 640 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 CCDC166P0CW27 439 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 CD1DP15813 335 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 CRABP2P29373 138 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 PHBP35232 272 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 GRK3P35626 688 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 SLC26A3P40879 764 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 CCR8P51685 355 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 RRADP55042 308 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 SLC9A5Q14940 896 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 TSNQ15631 228 aaKnown RBP13.3□□□□□ -0.28
GGA3-203ENST00000577435 NDUFA9Q16795 377 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 HKDC1Q2TB90 917 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 CCDC91Q7Z6B0 441 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 PLD3Q8IV08 490 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 C9orf43Q8TAL5 461 aaPredicted RBP13.3□□□□□ -0.28
GGA3-203ENST00000577435 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.3□□□□□ -0.28
GGA3-203ENST00000577435 IFT81Q8WYA0 676 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 ALKBH8Q96BT7 664 aaKnown RBP13.3□□□□□ -0.28
GGA3-203ENST00000577435 RHBDF1Q96CC6 855 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 CABS1Q96KC9 395 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 FMO2Q99518 471 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 SPSB2Q99619 263 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 TRIM55Q9BYV6 548 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 ING2Q9H160 280 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 ACSS3Q9H6R3 686 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 MLXIPLQ9NP71 852 aa13.3□□□□□ -0.28
GGA3-203ENST00000577435 ARGFXA6NJG6 315 aa13.29□□□□□ -0.28
GGA3-203ENST00000577435 P2RX6O15547 441 aa13.29□□□□□ -0.28
GGA3-203ENST00000577435 FOXS1O43638 330 aa13.29□□□□□ -0.28
GGA3-203ENST00000577435 CEACAM4O75871 244 aa13.29□□□□□ -0.28
GGA3-203ENST00000577435 CDH1P12830 882 aa13.29□□□□□ -0.28
GGA3-203ENST00000577435 MMP11P24347 488 aa13.29□□□□□ -0.28
GGA3-203ENST00000577435 GGT5P36269 586 aa13.29□□□□□ -0.28
GGA3-203ENST00000577435 CSRP3P50461 194 aa13.29□□□□□ -0.28
GGA3-203ENST00000577435 NFATC3Q12968 1075 aa13.29□□□□□ -0.28
GGA3-203ENST00000577435 TGFBIQ15582 683 aa13.29□□□□□ -0.28
GGA3-203ENST00000577435 MRGPREQ86SM8 312 aa13.29□□□□□ -0.28
GGA3-203ENST00000577435 ZNF605Q86T29 641 aa13.29□□□□□ -0.28
GGA3-203ENST00000577435 THOC6Q86W42 341 aaKnown RBP13.29□□□□□ -0.28
GGA3-203ENST00000577435 DTWD1Q8N5C7 304 aa13.29□□□□□ -0.28
GGA3-203ENST00000577435 MFSD9Q8NBP5 474 aa13.29□□□□□ -0.28
GGA3-203ENST00000577435 CAMKVQ8NCB2 501 aa13.29□□□□□ -0.28
GGA3-203ENST00000577435 SLC5A11Q8WWX8 675 aa13.29□□□□□ -0.28
GGA3-203ENST00000577435 KIAA1191Q96A73 305 aa13.29□□□□□ -0.28
GGA3-203ENST00000577435 COL26A1Q96A83 441 aa13.29□□□□□ -0.28
GGA3-203ENST00000577435 PELI2Q9HAT8 420 aa13.29□□□□□ -0.28
GGA3-203ENST00000577435 ACSS2Q9NR19 701 aa13.29□□□□□ -0.28
GGA3-203ENST00000577435 ZNF282Q9UDV7 671 aaPredicted RBP13.29□□□□□ -0.28
GGA3-203ENST00000577435 PCDHGA9Q9Y5G4 932 aaKnown RBP13.29□□□□□ -0.28
GGA3-203ENST00000577435 KCNE2Q9Y6J6 123 aa13.29□□□□□ -0.28
GGA3-203ENST00000577435 MAU2Q9Y6X3 613 aa13.29□□□□□ -0.28
GGA3-203ENST00000577435 PCSK5Q92824 1860 aa13.29□□□□□ -0.28
GGA3-203ENST00000577435 NBASA2RRP1 2371 aa13.28□□□□□ -0.28
GGA3-203ENST00000577435 NUP210LQ5VU65 1888 aa13.28□□□□□ -0.28
GGA3-203ENST00000577435 TRBC2A0A5B9 178 aa13.28□□□□□ -0.28
GGA3-203ENST00000577435 CCDC189A1A4V9 331 aa13.28□□□□□ -0.28
GGA3-203ENST00000577435 HMX2A2RU54 273 aa13.28□□□□□ -0.28
GGA3-203ENST00000577435 PRPF4O43172 522 aaKnown RBP eCLIP13.28□□□□□ -0.28
GGA3-203ENST00000577435 SLC35E2BP0CK96 405 aa13.28□□□□□ -0.28
GGA3-203ENST00000577435 OTX2P32243 289 aa13.28□□□□□ -0.28
GGA3-203ENST00000577435 BCL6P41182 706 aa13.28□□□□□ -0.28
GGA3-203ENST00000577435 SLC6A12P48065 614 aa13.28□□□□□ -0.28
GGA3-203ENST00000577435 SOX8P57073 446 aa13.28□□□□□ -0.28
GGA3-203ENST00000577435 OCA2Q04671 838 aa13.28□□□□□ -0.28
GGA3-203ENST00000577435 ATP1A4Q13733 1029 aa13.28□□□□□ -0.28
GGA3-203ENST00000577435 COL9A2Q14055 689 aaPredicted RBP13.28□□□□□ -0.28
GGA3-203ENST00000577435 DSG2Q14126 1118 aa13.28□□□□□ -0.28
GGA3-203ENST00000577435 CSHL1Q14406 222 aa13.28□□□□□ -0.28
GGA3-203ENST00000577435 EFTUD2Q15029 972 aaKnown RBP eCLIP13.28□□□□□ -0.284e-6■■■■■ 29
GGA3-203ENST00000577435 LACTB2Q53H82 288 aaPredicted RBP13.28□□□□□ -0.28
GGA3-203ENST00000577435 SULT1C3Q6IMI6 304 aa13.28□□□□□ -0.28
GGA3-203ENST00000577435 TMEM214Q6NUQ4 689 aaKnown RBP13.28□□□□□ -0.28
GGA3-203ENST00000577435 FRA10AC1Q70Z53 315 aa13.28□□□□□ -0.28
GGA3-203ENST00000577435 PPP1R32Q7Z5V6 425 aa13.28□□□□□ -0.28
GGA3-203ENST00000577435 ISCA2Q86U28 154 aa13.28□□□□□ -0.28
GGA3-203ENST00000577435 GPSM1Q86YR5 675 aa13.28□□□□□ -0.28
GGA3-203ENST00000577435 TCAIMQ8N3R3 496 aa13.28□□□□□ -0.28
GGA3-203ENST00000577435 SPATA6LQ8N4H0 392 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms