RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 CA9Q16790 459 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 PITRM1Q5JRX3 1037 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.46□□□□□ -1.38
SMG1-217ENST00000569764 SLITRK4Q8IW52 837 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 MMGT1Q8N4V1 131 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 ZNF655Q8N720 491 aaPredicted RBP6.46□□□□□ -1.38
SMG1-217ENST00000569764 FAM98AQ8NCA5 519 aaKnown RBP6.46□□□□□ -1.38
SMG1-217ENST00000569764 WDR36Q8NI36 951 aaKnown RBP6.46□□□□□ -1.38
SMG1-217ENST00000569764 SHKBP1Q8TBC3 707 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 PNPT1Q8TCS8 783 aaKnown RBP6.46□□□□□ -1.38
SMG1-217ENST00000569764 ADAMTS16Q8TE57 1224 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 ULBP1Q9BZM6 244 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 SDCBP2Q9H190 292 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 XYLT2Q9H1B5 865 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 TAS2R7Q9NYW3 318 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 SIX4Q9UIU6 781 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 C3orf18Q9UK00 162 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 FZD10Q9ULW2 581 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 NME7Q9Y5B8 376 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 ZNF236Q9UL36 1845 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 PRRC2BQ5JSZ5 2229 aaKnown RBP6.46□□□□□ -1.38
SMG1-217ENST00000569764 MYBPHLA2RUH7 354 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 C4orf47A7E2U8 309 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 SMLR1H3BR10 107 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 GNB5O14775 395 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 PMPCBO75439 489 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 KRT6AP02538 564 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 KRT6BP04259 564 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 HBQ1P09105 142 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 TMEM253P0C7T8 217 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 RNF224P0DH78 156 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 NR2C1P13056 603 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 PKMP14618 531 aaKnown RBP6.46□□□□□ -1.38
SMG1-217ENST00000569764 CD38P28907 300 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 GJC1P36383 396 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 PGM1P36871 562 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 SELENOVP59797 346 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 RPS21P63220 83 aaKnown RBP6.46□□□□□ -1.38
SMG1-217ENST00000569764 RING1Q06587 406 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 MERTKQ12866 999 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 LCP2Q13094 533 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 SF1Q15637 639 aaKnown RBP6.46□□□□□ -1.38
SMG1-217ENST00000569764 DNAL1Q4LDG9 190 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 ATAD3BQ5T9A4 648 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 MLIPQ5VWP3 458 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 PARM1Q6UWI2 310 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 RNF19BQ6ZMZ0 732 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 ASPGQ86U10 573 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 ZNF680Q8NEM1 530 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 SLC24A4Q8NFF2 622 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 LRRC20Q8TCA0 184 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 CKAP2Q8WWK9 683 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 TFAP2BQ92481 460 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 C7orf34Q96L11 122 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 DCBLD2Q96PD2 775 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 PANX1Q96RD7 426 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 KRT12Q99456 494 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 SLC38A3Q99624 504 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 DDX47Q9H0S4 455 aaKnown RBP6.46□□□□□ -1.38
SMG1-217ENST00000569764 RMND5AQ9H871 391 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 L3MBTL1Q9Y468 752 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 ALG6Q9Y672 507 aa6.46□□□□□ -1.38
SMG1-217ENST00000569764 ASPMQ8IZT6 3477 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 TMEM210A6NLX4 147 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 CBX4O00257 560 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 CASC3O15234 703 aaKnown RBP6.45□□□□□ -1.38
SMG1-217ENST00000569764 GATCO43716 136 aaKnown RBP6.45□□□□□ -1.38
SMG1-217ENST00000569764 GPRIN2O60269 458 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 CBR3O75828 277 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 CCNKO75909 580 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 TM7SF2O76062 418 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 CNTN5O94779 1100 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 SYF2O95926 243 aaKnown RBP6.45□□□□□ -1.38
SMG1-217ENST00000569764 UGT2B4P06133 528 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 CSF1P09603 554 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 ARL1P40616 181 aaPredicted RBP6.45□□□□□ -1.38
SMG1-217ENST00000569764 RAP1GAPP47736 663 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 KRT6CP48668 564 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 VAMP2P63027 116 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 NTHL1P78549 312 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 SCN1BQ07699 218 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 PTP4A2Q12974 167 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 BTBD16Q32M84 506 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 BSPRYQ5W0U4 402 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 FBXO42Q6P3S6 717 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 WDR88Q6ZMY6 472 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 KIAA0408Q6ZU52 694 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 RETREG3Q86VR2 466 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 ARMC10Q8N2F6 343 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 CPXM2Q8N436 756 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 ARFGAP1Q8N6T3 406 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 ENDOVQ8N8Q3 282 aaKnown RBP6.45□□□□□ -1.38
SMG1-217ENST00000569764 ADCY4Q8NFM4 1077 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 LIPHQ8WWY8 451 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 HMCESQ96FZ2 354 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 TPD52L3Q96J77 140 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 QRFPRQ96P65 431 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 TRAPPC9Q96Q05 1148 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 PNPLA3Q9NST1 481 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 FAM120CQ9NX05 1096 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms