RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 GARNL3Q5VVW2 1013 aa19.16■□□□□ 0.66
ABCA3-206ENST00000569062 KIRREL2Q6UWL6 708 aa19.16■□□□□ 0.66
ABCA3-206ENST00000569062 LCTLQ6UWM7 567 aa19.16■□□□□ 0.66
ABCA3-206ENST00000569062 SBSNQ6UWP8 590 aa19.16■□□□□ 0.66
ABCA3-206ENST00000569062 VN1R4Q7Z5H5 301 aa19.16■□□□□ 0.66
ABCA3-206ENST00000569062 C17orf64Q86WR6 236 aa19.16■□□□□ 0.66
ABCA3-206ENST00000569062 NACC2Q96BF6 587 aa19.16■□□□□ 0.66
ABCA3-206ENST00000569062 MIEF2Q96C03 454 aa19.16■□□□□ 0.66
ABCA3-206ENST00000569062 MMABQ96EY8 250 aaPredicted RBP19.16■□□□□ 0.66
ABCA3-206ENST00000569062 PDLIM5Q96HC4 596 aaKnown RBP19.16■□□□□ 0.66
ABCA3-206ENST00000569062 MCMBPQ9BTE3 642 aa19.16■□□□□ 0.66
ABCA3-206ENST00000569062 FBXL4Q9UKA2 621 aa19.16■□□□□ 0.66
ABCA3-206ENST00000569062 CDC14AQ9UNH5 594 aa19.16■□□□□ 0.66
ABCA3-206ENST00000569062 MRPS2Q9Y399 296 aaKnown RBP19.16■□□□□ 0.66
ABCA3-206ENST00000569062 UTP11Q9Y3A2 253 aaKnown RBP19.16■□□□□ 0.66
ABCA3-206ENST00000569062 DOCK10Q96BY6 2186 aa19.16■□□□□ 0.66
ABCA3-206ENST00000569062 IGLV3-12A0A075B6K2 115 aa19.15■□□□□ 0.66
ABCA3-206ENST00000569062 A0A0A6YYC8 382 aaPredicted RBP19.15■□□□□ 0.66
ABCA3-206ENST00000569062 CXorf49A8MYA2 514 aaPredicted RBP19.15■□□□□ 0.66
ABCA3-206ENST00000569062 I3L1I5 382 aaPredicted RBP19.15■□□□□ 0.66
ABCA3-206ENST00000569062 EIF3HO15372 352 aaKnown RBP eCLIP19.15■□□□□ 0.66
ABCA3-206ENST00000569062 CDH1P12830 882 aa19.15■□□□□ 0.66
ABCA3-206ENST00000569062 CCND1P24385 295 aa19.15■□□□□ 0.66
ABCA3-206ENST00000569062 AP1S2P56377 157 aa19.15■□□□□ 0.66
ABCA3-206ENST00000569062 RPS15AP62244 130 aaKnown RBP19.15■□□□□ 0.66
ABCA3-206ENST00000569062 CAPN13Q6MZZ7 669 aaPredicted RBP19.15■□□□□ 0.66
ABCA3-206ENST00000569062 LAPTM4BQ86VI4 370 aa19.15■□□□□ 0.66
ABCA3-206ENST00000569062 CEP97Q8IW35 865 aa19.15■□□□□ 0.66
ABCA3-206ENST00000569062 AMER3Q8N944 861 aa19.15■□□□□ 0.66
ABCA3-206ENST00000569062 OR56A3Q8NH54 315 aa19.15■□□□□ 0.66
ABCA3-206ENST00000569062 MVB12AQ96EY5 273 aa19.15■□□□□ 0.66
ABCA3-206ENST00000569062 VPS39Q96JC1 886 aa19.15■□□□□ 0.66
ABCA3-206ENST00000569062 MACROD1Q9BQ69 325 aa19.15■□□□□ 0.66
ABCA3-206ENST00000569062 CRB3Q9BUF7 120 aa19.15■□□□□ 0.66
ABCA3-206ENST00000569062 YIPF2Q9BWQ6 316 aa19.15■□□□□ 0.66
ABCA3-206ENST00000569062 MFRPQ9BY79 579 aa19.15■□□□□ 0.66
ABCA3-206ENST00000569062 TRIM54Q9BYV2 358 aa19.15■□□□□ 0.66
ABCA3-206ENST00000569062 DRC3Q9H069 523 aa19.15■□□□□ 0.66
ABCA3-206ENST00000569062 RHOJQ9H4E5 214 aa19.15■□□□□ 0.66
ABCA3-206ENST00000569062 ZNF552Q9H707 407 aaPredicted RBP19.15■□□□□ 0.66
ABCA3-206ENST00000569062 ATP13A2Q9NQ11 1180 aa19.15■□□□□ 0.66
ABCA3-206ENST00000569062 SEMA3GQ9NS98 782 aa19.15■□□□□ 0.66
ABCA3-206ENST00000569062 NSMCE4AQ9NXX6 385 aa19.15■□□□□ 0.66
ABCA3-206ENST00000569062 TRPC4Q9UBN4 977 aa19.15■□□□□ 0.66
ABCA3-206ENST00000569062 PLAAQ9Y263 795 aa19.15■□□□□ 0.66
ABCA3-206ENST00000569062 SCN3AQ9NY46 2000 aa19.15■□□□□ 0.66
ABCA3-206ENST00000569062 KCNE1BA0A087WTH5 132 aa19.14■□□□□ 0.65
ABCA3-206ENST00000569062 PABPN1LA6NDY0 278 aaKnown RBP19.14■□□□□ 0.65
ABCA3-206ENST00000569062 NPEPPSL1A6NEC2 478 aa19.14■□□□□ 0.65
ABCA3-206ENST00000569062 CDC7O00311 574 aa19.14■□□□□ 0.65
ABCA3-206ENST00000569062 TXNDC9O14530 226 aa19.14■□□□□ 0.65
ABCA3-206ENST00000569062 LCMT2O60294 686 aaKnown RBP19.14■□□□□ 0.65
ABCA3-206ENST00000569062 DPM1O60762 260 aa19.14■□□□□ 0.65
ABCA3-206ENST00000569062 ENO2P09104 434 aaPredicted RBP19.14■□□□□ 0.65
ABCA3-206ENST00000569062 SLC26A3P40879 764 aa19.14■□□□□ 0.65
ABCA3-206ENST00000569062 BCL6P41182 706 aa19.14■□□□□ 0.65
ABCA3-206ENST00000569062 PLTPP55058 493 aa19.14■□□□□ 0.65
ABCA3-206ENST00000569062 DSG2Q14126 1118 aa19.14■□□□□ 0.65
ABCA3-206ENST00000569062 MYBPC3Q14896 1274 aa19.14■□□□□ 0.65
ABCA3-206ENST00000569062 RBBP7Q16576 425 aa19.14■□□□□ 0.65
ABCA3-206ENST00000569062 PPP1R3AQ16821 1122 aa19.14■□□□□ 0.65
ABCA3-206ENST00000569062 SYT16Q17RD7 645 aa19.14■□□□□ 0.65
ABCA3-206ENST00000569062 ZNF572Q7Z3I7 529 aaPredicted RBP19.14■□□□□ 0.65
ABCA3-206ENST00000569062 NKAPQ8N5F7 415 aaKnown RBP19.14■□□□□ 0.65
ABCA3-206ENST00000569062 RBMXL3Q8N7X1 1067 aaKnown RBP19.14■□□□□ 0.65
ABCA3-206ENST00000569062 ANKRD49Q8WVL7 239 aa19.14■□□□□ 0.65
ABCA3-206ENST00000569062 FBXL8Q96CD0 374 aa19.14■□□□□ 0.65
ABCA3-206ENST00000569062 OR4K3Q96R72 315 aa19.14■□□□□ 0.65
ABCA3-206ENST00000569062 LUZP4Q9P127 313 aa19.14■□□□□ 0.65
ABCA3-206ENST00000569062 TCRBV9S1A1TA0A576 114 aa19.13■□□□□ 0.65
ABCA3-206ENST00000569062 CD97P48960 835 aa19.13■□□□□ 0.65
ABCA3-206ENST00000569062 SOX8P57073 446 aa19.13■□□□□ 0.65
ABCA3-206ENST00000569062 GPX6P59796 221 aa19.13■□□□□ 0.65
ABCA3-206ENST00000569062 MEF2AQ02078 507 aaPredicted RBP19.13■□□□□ 0.65
ABCA3-206ENST00000569062 AIMP2Q13155 320 aaKnown RBP19.13■□□□□ 0.65
ABCA3-206ENST00000569062 FAM53BQ14153 422 aa19.13■□□□□ 0.65
ABCA3-206ENST00000569062 TUBB8Q3ZCM7 444 aa19.13■□□□□ 0.65
ABCA3-206ENST00000569062 VWA5B1Q5TIE3 1220 aa19.13■□□□□ 0.65
ABCA3-206ENST00000569062 JMJD6Q6NYC1 403 aaPredicted RBP19.13■□□□□ 0.65
ABCA3-206ENST00000569062 ZDHHC24Q6UX98 284 aa19.13■□□□□ 0.65
ABCA3-206ENST00000569062 PRSS41Q7RTY9 318 aa19.13■□□□□ 0.65
ABCA3-206ENST00000569062 OR11G2Q8NGC1 345 aa19.13■□□□□ 0.65
ABCA3-206ENST00000569062 FBXO25Q8TCJ0 367 aa19.13■□□□□ 0.65
ABCA3-206ENST00000569062 MIB2Q96AX9 1013 aa19.13■□□□□ 0.65
ABCA3-206ENST00000569062 TM4SF19Q96DZ7 209 aa19.13■□□□□ 0.65
ABCA3-206ENST00000569062 C16orf45Q96MC5 204 aaPredicted RBP19.13■□□□□ 0.65
ABCA3-206ENST00000569062 HAUS8Q9BT25 410 aa19.13■□□□□ 0.65
ABCA3-206ENST00000569062 RAB17Q9H0T7 212 aa19.13■□□□□ 0.65
ABCA3-206ENST00000569062 CAB39LQ9H9S4 337 aa19.13■□□□□ 0.65
ABCA3-206ENST00000569062 C3orf18Q9UK00 162 aa19.13■□□□□ 0.65
ABCA3-206ENST00000569062 NOVA2Q9UNW9 492 aaKnown RBP19.13■□□□□ 0.65
ABCA3-206ENST00000569062 MTO1Q9Y2Z2 717 aaKnown RBP19.13■□□□□ 0.65
ABCA3-206ENST00000569062 TTLL8A6PVC2 850 aa19.12■□□□□ 0.65
ABCA3-206ENST00000569062 PRPF4O43172 522 aaKnown RBP eCLIP19.12■□□□□ 0.65
ABCA3-206ENST00000569062 SORBS2O94875 1100 aaKnown RBP19.12■□□□□ 0.65
ABCA3-206ENST00000569062 C1QAP02745 245 aa19.12■□□□□ 0.65
ABCA3-206ENST00000569062 ANXA5P08758 320 aa19.12■□□□□ 0.65
ABCA3-206ENST00000569062 ITGA3P26006 1051 aa19.12■□□□□ 0.65
ABCA3-206ENST00000569062 MAT1AQ00266 395 aaKnown RBP19.12■□□□□ 0.65
ABCA3-206ENST00000569062 NDUFA9Q16795 377 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms