RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 BTRCQ9Y297 605 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 TLN1Q9Y490 2541 aaKnown RBP7.06□□□□□ -1.28
SPG11-213ENST00000558988 IGLV3-16A0A075B6K0 115 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 TRBV5-4A0A0C4DH59 114 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 C17orf113A0A1B0GUU1 675 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 HEATR9A2RTY3 570 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 GOLGA6L3A6NEY3 463 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 AGAP14A8MT82 685 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 IQCF5A8MTL0 148 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 MATN2O00339 956 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 LIN7AO14910 233 aaPredicted RBP7.06□□□□□ -1.28
SPG11-213ENST00000558988 ZNF749O43361 778 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 ZNF189O75820 626 aaPredicted RBP7.06□□□□□ -1.28
SPG11-213ENST00000558988 OR2B3O76000 313 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 AP2A2O94973 939 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 CHRM5P08912 532 aaPredicted RBP7.06□□□□□ -1.28
SPG11-213ENST00000558988 OR56A5P0C7T3 313 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 FOXN2P32314 431 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 SHMT2P34897 504 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 CCNFP41002 786 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 NSG1P42857 185 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 GSDMDP57764 484 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 CRADDP78560 199 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 CDH17Q12864 832 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 KLF1Q13351 362 aaPredicted RBP7.06□□□□□ -1.28
SPG11-213ENST00000558988 ATP1A4Q13733 1029 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 UGT8Q16880 541 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 NADK2Q4G0N4 442 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 FASTKD1Q53R41 847 aaKnown RBP7.06□□□□□ -1.28
SPG11-213ENST00000558988 PLEKHS1Q5SXH7 462 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 TSTD2Q5T7W7 516 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 TCTN3Q6NUS6 607 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 AFTPHQ6ULP2 937 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 FAM198BQ6UWH4 519 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 UNC5AQ6ZN44 842 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 GSTA5Q7RTV2 222 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 ADGRF3Q8IZF5 1079 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 DSELQ8IZU8 1212 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 KRT222Q8N1A0 295 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 C19orf47Q8N9M1 422 aaKnown RBP7.06□□□□□ -1.28
SPG11-213ENST00000558988 GLIS1Q8NBF1 620 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 PPHLN1Q8NEY8 458 aaKnown RBP7.06□□□□□ -1.28
SPG11-213ENST00000558988 OR8K5Q8NH50 307 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 LKAAEAR1Q8TD35 194 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 FAM136AQ96C01 138 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 HES6Q96HZ4 224 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 ZNF778Q96MU6 729 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 IL17FQ96PD4 163 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 FCRL4Q96PJ5 515 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 TRAPPC9Q96Q05 1148 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 TTC1Q99614 292 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 GPR87Q9BY21 358 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 SPRTNQ9H040 489 aaPredicted RBP7.06□□□□□ -1.28
SPG11-213ENST00000558988 TFB2MQ9H5Q4 396 aaKnown RBP7.06□□□□□ -1.28
SPG11-213ENST00000558988 FAM60AQ9NP50 221 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 TXLNGQ9NUQ3 528 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 SPHK1Q9NYA1 384 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 NDOR1Q9UHB4 597 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 PCDHGA6Q9Y5G7 932 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 ATMQ13315 3056 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 DOPEY2Q9Y3R5 2298 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 MYO18BQ8IUG5 2567 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 CFAP46Q8IYW2 2715 aa7.06□□□□□ -1.28
SPG11-213ENST00000558988 KALRNO60229 2985 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 KRT87PA6NCN2 255 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 H7C0S8 307 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 MASP2O00187 686 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 SHOXO15266 292 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 HCRTR1O43613 425 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 FOXS1O43638 330 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 KRT86O43790 486 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 TMEM63AO94886 807 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 CBSLP0DN79 551 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 IFNGR1P15260 489 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 AGXTP21549 392 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 CBSP35520 551 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 FDFT1P37268 417 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 GRIA3P42263 894 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 UQCRFS1P47985 274 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 CD151P48509 253 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 VPS41P49754 854 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 CLCQ05315 142 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 RPA4Q13156 261 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 TSTA3Q13630 321 aaPredicted RBP7.05□□□□□ -1.28
SPG11-213ENST00000558988 SEMA3AQ14563 771 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 ITIH4Q14624 930 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 TMED2Q15363 201 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 RPS6KA1Q15418 735 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 TRIP13Q15645 432 aaPredicted RBP7.05□□□□□ -1.28
SPG11-213ENST00000558988 ZIC1Q15915 447 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 ZNF658BQ4V348 819 aaPredicted RBP7.05□□□□□ -1.28
SPG11-213ENST00000558988 PRR30Q53SZ7 412 aaPredicted RBP7.05□□□□□ -1.28
SPG11-213ENST00000558988 PTRHD1Q6GMV3 140 aaKnown RBP7.05□□□□□ -1.28
SPG11-213ENST00000558988 CES3Q6UWW8 571 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 SLC13A5Q86YT5 568 aaPredicted RBP7.05□□□□□ -1.28
SPG11-213ENST00000558988 VRK3Q8IV63 474 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 METTL27Q8N6F8 245 aaPredicted RBP7.05□□□□□ -1.28
SPG11-213ENST00000558988 OR13J1Q8NGT2 312 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 GSDMBQ8TAX9 411 aa7.05□□□□□ -1.28
SPG11-213ENST00000558988 THAP4Q8WY91 577 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms