RNA–Protein interactions for RNA: ENST00000558953.1

MARK3-216, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-216ENST00000558953 RSRP1Q9BUV0 290 aa5.89□□□□□ -1.47
MARK3-216ENST00000558953 NUDT9Q9BW91 350 aa5.89□□□□□ -1.47
MARK3-216ENST00000558953 RAB11FIP5Q9BXF6 653 aa5.89□□□□□ -1.47
MARK3-216ENST00000558953 IL22Q9GZX6 179 aa5.89□□□□□ -1.47
MARK3-216ENST00000558953 CHRAC1Q9NRG0 131 aa5.89□□□□□ -1.47
MARK3-216ENST00000558953 INTS7Q9NVH2 962 aaKnown RBP5.89□□□□□ -1.47
MARK3-216ENST00000558953 EURLQ9NYK6 297 aa5.89□□□□□ -1.47
MARK3-216ENST00000558953 GPR83Q9NYM4 423 aa5.89□□□□□ -1.47
MARK3-216ENST00000558953 BFARQ9NZS9 450 aa5.89□□□□□ -1.47
MARK3-216ENST00000558953 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.89□□□□□ -1.47
MARK3-216ENST00000558953 C5AR2Q9P296 337 aa5.89□□□□□ -1.47
MARK3-216ENST00000558953 DHCR7Q9UBM7 475 aaKnown RBP5.89□□□□□ -1.47
MARK3-216ENST00000558953 NDOR1Q9UHB4 597 aa5.89□□□□□ -1.47
MARK3-216ENST00000558953 GNPTGQ9UJJ9 305 aa5.89□□□□□ -1.47
MARK3-216ENST00000558953 SNX12Q9UMY4 172 aa5.89□□□□□ -1.47
MARK3-216ENST00000558953 CDYLQ9Y232 598 aa5.89□□□□□ -1.47
MARK3-216ENST00000558953 PTRH2Q9Y3E5 179 aaKnown RBP5.89□□□□□ -1.47
MARK3-216ENST00000558953 BSNQ9UPA5 3926 aa5.89□□□□□ -1.47
MARK3-216ENST00000558953 PRRC2CQ9Y520 2896 aaKnown RBP5.88□□□□□ -1.47
MARK3-216ENST00000558953 MDC1Q14676 2089 aaKnown RBP5.88□□□□□ -1.47
MARK3-216ENST00000558953 HEATR5BQ9P2D3 2071 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 CCDC151A5D8V7 595 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 IQCF5A8MTL0 148 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 CCDC188H7C350 402 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 RASGRF2O14827 1237 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 PFDN6O15212 129 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 NDUFS3O75489 264 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 ONECUT2O95948 504 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 ALPPP05187 535 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 ZSCAN5DPP0CG00 497 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 PIM1P11309 404 aaPredicted RBP5.88□□□□□ -1.47
MARK3-216ENST00000558953 CCNFP41002 786 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 BASP1P80723 227 aaKnown RBP5.88□□□□□ -1.47
MARK3-216ENST00000558953 CDK16Q00536 496 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 GRB7Q14451 532 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 GRM7Q14831 915 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 SIX1Q15475 284 aaPredicted RBP5.88□□□□□ -1.47
MARK3-216ENST00000558953 SF1Q15637 639 aaKnown RBP5.88□□□□□ -1.47
MARK3-216ENST00000558953 INPP5JQ15735 1006 aaPredicted RBP5.88□□□□□ -1.47
MARK3-216ENST00000558953 TCTE1Q5JU00 501 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 DCAF10Q5QP82 559 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 TEX35Q5T0J7 233 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 FHL5Q5TD97 284 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 VWA5B1Q5TIE3 1220 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 ARMC3Q5W041 872 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 JMJD6Q6NYC1 403 aaPredicted RBP5.88□□□□□ -1.47
MARK3-216ENST00000558953 CEP128Q6ZU80 1094 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 GSTA5Q7RTV2 222 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 OTOAQ7RTW8 1153 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 MAATS1Q7Z4T9 603 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 PPP1R32Q7Z5V6 425 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 SDCCAG8Q86SQ7 713 aaPredicted RBP5.88□□□□□ -1.47
MARK3-216ENST00000558953 VRK3Q8IV63 474 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 MCATQ8IVS2 390 aaKnown RBP5.88□□□□□ -1.47
MARK3-216ENST00000558953 SULF2Q8IWU5 870 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 KRT222Q8N1A0 295 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 PLD6Q8N2A8 252 aaKnown RBP5.88□□□□□ -1.47
MARK3-216ENST00000558953 OTUD6BQ8N6M0 293 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 RBMXL3Q8N7X1 1067 aaKnown RBP5.88□□□□□ -1.47
MARK3-216ENST00000558953 LMNTD1Q8N9Z9 388 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 LINC01555Q8NAE3 123 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 CLEC1AQ8NC01 280 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 LKAAEAR1Q8TD35 194 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 SKA2Q8WVK7 121 aaPredicted RBP5.88□□□□□ -1.47
MARK3-216ENST00000558953 PNPLA2Q96AD5 504 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 ZUFSPQ96AP4 578 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 FKBP10Q96AY3 582 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 NACC2Q96BF6 587 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 FOPNLQ96NB1 174 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 IL17FQ96PD4 163 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 SMAD5Q99717 465 aaKnown RBP5.88□□□□□ -1.47
MARK3-216ENST00000558953 MENTQ9BUN1 341 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 SLC29A3Q9BZD2 475 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 P2RY12Q9H244 342 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 SOX17Q9H6I2 414 aaPredicted RBP5.88□□□□□ -1.47
MARK3-216ENST00000558953 WDR54Q9H977 334 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 MRM3Q9HC36 420 aaKnown RBP5.88□□□□□ -1.47
MARK3-216ENST00000558953 SLAMF7Q9NQ25 335 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 HOMER3Q9NSC5 361 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 TREX1Q9NSU2 369 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 P4HTMQ9NXG6 502 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 MARCH4Q9P2E8 410 aaPredicted RBP5.88□□□□□ -1.47
MARK3-216ENST00000558953 CIDEBQ9UHD4 219 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 ACTL7BQ9Y614 415 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 PCSK5Q92824 1860 aa5.88□□□□□ -1.47
MARK3-216ENST00000558953 A0A1B0GX78 115 aa5.87□□□□□ -1.47
MARK3-216ENST00000558953 TARM1B6A8C7 271 aa5.87□□□□□ -1.47
MARK3-216ENST00000558953 H3BMM5 538 aa5.87□□□□□ -1.47
MARK3-216ENST00000558953 PGRMC1O00264 195 aaKnown RBP5.87□□□□□ -1.47
MARK3-216ENST00000558953 DSCR3O14972 297 aa5.87□□□□□ -1.47
MARK3-216ENST00000558953 RRP9O43818 475 aaKnown RBP5.87□□□□□ -1.47
MARK3-216ENST00000558953 PRICKLE3O43900 615 aaPredicted RBP5.87□□□□□ -1.47
MARK3-216ENST00000558953 CEP104O60308 925 aa5.87□□□□□ -1.47
MARK3-216ENST00000558953 SRPX2O60687 465 aaPredicted RBP5.87□□□□□ -1.47
MARK3-216ENST00000558953 CNOT3O75175 753 aaKnown RBP5.87□□□□□ -1.47
MARK3-216ENST00000558953 IPO13O94829 963 aaKnown RBP5.87□□□□□ -1.47
MARK3-216ENST00000558953 VAPBO95292 243 aa5.87□□□□□ -1.47
MARK3-216ENST00000558953 C1orf105O95561 183 aa5.87□□□□□ -1.47
MARK3-216ENST00000558953 FGGP02679 453 aa5.87□□□□□ -1.47
MARK3-216ENST00000558953 TPSB2P20231 275 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms