RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, human

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPHN-215	ENST00000557654	SYN2	Q92777	582 aa	Predicted RBP	4.25	□□□□□ -1.73
GPHN-215	ENST00000557654	SFXN2	Q96NB2	322 aa		4.25	□□□□□ -1.73
GPHN-215	ENST00000557654	GCNA	Q96QF7	691 aa		4.25	□□□□□ -1.73
GPHN-215	ENST00000557654	UPF3B	Q9BZI7	483 aa	Known RBP	4.25	□□□□□ -1.73
GPHN-215	ENST00000557654	LSG1	Q9H089	658 aa	Known RBP	4.25	□□□□□ -1.73
GPHN-215	ENST00000557654	WNT5B	Q9H1J7	359 aa		4.25	□□□□□ -1.73
GPHN-215	ENST00000557654	TNMD	Q9H2S6	317 aa		4.25	□□□□□ -1.73
GPHN-215	ENST00000557654	ARGLU1	Q9NWB6	273 aa	Predicted RBP	4.25	□□□□□ -1.73
GPHN-215	ENST00000557654	HYPK	Q9NX55	129 aa		4.25	□□□□□ -1.73
GPHN-215	ENST00000557654	POLK	Q9UBT6	870 aa		4.25	□□□□□ -1.73
GPHN-215	ENST00000557654	CLIP2	Q9UDT6	1046 aa		4.25	□□□□□ -1.73
GPHN-215	ENST00000557654	NRBP1	Q9UHY1	535 aa		4.25	□□□□□ -1.73
GPHN-215	ENST00000557654	FBXO2	Q9UK22	296 aa	Predicted RBP	4.25	□□□□□ -1.73
GPHN-215	ENST00000557654	RPS6KA6	Q9UK32	745 aa		4.25	□□□□□ -1.73
GPHN-215	ENST00000557654	STUB1	Q9UNE7	303 aa		4.25	□□□□□ -1.73
GPHN-215	ENST00000557654	CRYBG1	Q9Y4K1	1723 aa		4.25	□□□□□ -1.73
GPHN-215	ENST00000557654	NME7	Q9Y5B8	376 aa		4.25	□□□□□ -1.73
GPHN-215	ENST00000557654	PXDNL	A1KZ92	1463 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	PHLPP2	Q6ZVD8	1323 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	ERCC6L2	Q5T890	1561 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	NRK	Q7Z2Y5	1582 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	ERICH4	A6NGS2	130 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	CCDC69	A6NI79	296 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	DANCR	P0C864	163 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	ZSCAN5DP	P0CG00	497 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	HAPLN1	P10915	354 aa	Predicted RBP	4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	SKIL	P12757	684 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	GJB2	P29033	226 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	CASQ1	P31415	396 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	LEPR	P48357	1165 aa	Known RBP	4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	LBX1	P52954	281 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	BAAT	Q14032	418 aa	Predicted RBP	4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	CBWD6	Q4V339	395 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	CBWD3	Q5JTY5	395 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	CCDC158	Q5M9N0	1113 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	SPATA1	Q5VX52	437 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	NIPA2	Q8N8Q9	360 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	GOLGA5	Q8TBA6	731 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	SMAP2	Q8WU79	429 aa	Predicted RBP	4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	PIGB	Q92521	554 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	EXOC4	Q96A65	974 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	FAM20A	Q96MK3	541 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	PKP2	Q99959	881 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	DGCR6L	Q9BY27	220 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	FGFBP2	Q9BYJ0	223 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	CPVL	Q9H3G5	476 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	MYNN	Q9NPC7	610 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	FAM207A	Q9NSI2	230 aa	Predicted RBP	4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	PRMT7	Q9NVM4	692 aa	Predicted RBP	4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	SPHK1	Q9NYA1	384 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	ERAP1	Q9NZ08	941 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	GDE1	Q9NZC3	331 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	CHORDC1	Q9UHD1	332 aa	Predicted RBP	4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	RNF150	Q9ULK6	438 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	MAGED1	Q9Y5V3	778 aa	Predicted RBP	4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	DLC1	Q96QB1	1528 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	MAP3K5	Q99683	1374 aa		4.24	□□□□□ -1.73
GPHN-215	ENST00000557654	TTC41P	Q6P2S7	1318 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	CHD2	O14647	1828 aa	Known RBP	4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	PREX1	Q8TCU6	1659 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	CRB1	P82279	1406 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	EDC4	Q6P2E9	1401 aa	Known RBP	4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	PCNX3	Q9H6A9	2034 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	N4BP2	Q86UW6	1770 aa	Predicted RBP	4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	USP27X	A6NNY8	438 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654		E9PQ18	207 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	MAGEC1	O60732	1142 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	PFKFB1	P16118	471 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	MAPK12	P53778	367 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	HERV-K104	P61576	105 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	LMO4	P61968	165 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	SLC1A5	Q15758	541 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	STX1A	Q16623	288 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	ZSCAN26	Q16670	478 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	CTU2	Q2VPK5	515 aa	Known RBP	4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	UGT3A2	Q3SY77	523 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	BSPRY	Q5W0U4	402 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	ATL3	Q6DD88	541 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	NUP54	Q7Z3B4	507 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	MMD2	Q8IY49	270 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	LSMEM2	Q8N112	164 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	BMPER	Q8N8U9	685 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	THAP8	Q8NA92	274 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	SLAMF9	Q96A28	289 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	THOC1	Q96FV9	657 aa	Known RBP	4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	ZNF486	Q96H40	463 aa	Predicted RBP	4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	NECTIN4	Q96NY8	510 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	CCDC3	Q9BQI4	270 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	THUMPD2	Q9BTF0	503 aa	Known RBP	4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	MIS12	Q9H081	205 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	THAP2	Q9H0W7	228 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	CCDC68	Q9H2F9	335 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	NSMCE4A	Q9NXX6	385 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	HAO2	Q9NYQ3	351 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	CPSF2	Q9P2I0	782 aa	Known RBP	4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	GRID1	Q9ULK0	1009 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	PPP1R3C	Q9UQK1	317 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	SNX8	Q9Y5X2	465 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	ITSN1	Q15811	1721 aa		4.23	□□□□□ -1.73
GPHN-215	ENST00000557654	TDRD15	B5MCY1	1934 aa	Known RBP	4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms